Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC113404.2-201ENST00000507884 177 ntBASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 FAM86EP-206ENST00000510506 987 ntBASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 GPR32P1-201ENST00000601788 811 ntBASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC091076.1-201ENST00000610741 619 ntBASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC005332.1-201ENST00000577698 1310 ntBASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 IER3-202ENST00000376377 1350 ntBASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1Q5Y7H0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC005332.3-201ENST00000589904 676 ntBASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1Q5Y7H0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 IGHGP-201ENST00000390555 1178 ntBASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 SPDYE13P-201ENST00000445314 798 ntBASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DQA1Q5Y7H0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms