Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 CROCCP2-202ENST00000412962 2773 ntBASIC17.44■□□□□ 0.38
RNF220Q5VTB9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 KRT16P1-201ENST00000399124 1418 ntBASIC17.44■□□□□ 0.38
RNF220Q5VTB9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 RPS2P4-201ENST00000476944 856 ntBASIC17.43■□□□□ 0.38
RNF220Q5VTB9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 ITM2C-210ENST00000620962 501 ntBASIC17.43■□□□□ 0.38
RNF220Q5VTB9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF220Q5VTB9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 RCC2P6-201ENST00000526625 1557 ntBASIC17.42■□□□□ 0.38
RNF220Q5VTB9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 FAM201B-201ENST00000458407 597 ntBASIC17.42■□□□□ 0.38
RNF220Q5VTB9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.42■□□□□ 0.38
RNF220Q5VTB9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 LINC01126-201ENST00000623515 1646 ntBASIC17.42■□□□□ 0.38
RNF220Q5VTB9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF220Q5VTB9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms