Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.32■□□□□ 0.04
ARFGEF3Q5TH69 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARFGEF3Q5TH69 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARFGEF3Q5TH69 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 POM121L3P-201ENST00000419331 1163 ntBASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 MINOS1P3-201ENST00000457048 203 ntBASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 AC093010.1-201ENST00000473625 1624 ntBASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 AC008687.5-201ENST00000593746 558 ntBASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.31■□□□□ 0.04
ARFGEF3Q5TH69 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 AC132938.6-201ENST00000623828 1655 ntBASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 AC018712.1-201ENST00000455767 687 ntBASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 KRT8P47-201ENST00000604727 1398 ntBASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ARFGEF3Q5TH69 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 KRT18P67-201ENST00000432816 1264 ntBASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 KRT18P65-201ENST00000439811 1286 ntBASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 MTCL1P1-201ENST00000446207 792 ntBASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 AL662844.1-201ENST00000546340 181 ntBASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms