Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH17Q12864 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH17Q12864 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH17Q12864 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 LINC00167-201ENST00000530583 1419 ntBASIC18.26■□□□□ 0.51
CDH17Q12864 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH17Q12864 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDH17Q12864 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.26■□□□□ 0.51
CDH17Q12864 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDH17Q12864 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH17Q12864 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH17Q12864 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH17Q12864 KRT89P-201ENST00000620027 1478 ntBASIC18.26■□□□□ 0.51
CDH17Q12864 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDH17Q12864 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH17Q12864 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH17Q12864 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDH17Q12864 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH17Q12864 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH17Q12864 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 AC073508.3-201ENST00000619697 1419 ntBASIC18.25■□□□□ 0.51
CDH17Q12864 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH17Q12864 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDH17Q12864 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH17Q12864 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDH17Q12864 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH17Q12864 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH17Q12864 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH17Q12864 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 AC024563.2-201ENST00000603282 481 ntBASIC18.25■□□□□ 0.51
CDH17Q12864 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDH17Q12864 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH17Q12864 AC006116.8-202ENST00000587620 1550 ntBASIC18.25■□□□□ 0.51
CDH17Q12864 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CDH17Q12864 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH17Q12864 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH17Q12864 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 AC022898.2-201ENST00000616822 1312 ntBASIC18.24■□□□□ 0.51
CDH17Q12864 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
CDH17Q12864 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDH17Q12864 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 AC012317.2-201ENST00000623305 2251 ntBASIC18.24■□□□□ 0.51
CDH17Q12864 AL391807.1-203ENST00000604392 2365 ntBASIC18.24■□□□□ 0.51
CDH17Q12864 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH17Q12864 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH17Q12864 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDH17Q12864 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH17Q12864 STARP1-201ENST00000397973 869 ntBASIC18.24■□□□□ 0.51
CDH17Q12864 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CDH17Q12864 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.24■□□□□ 0.51
CDH17Q12864 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDH17Q12864 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH17Q12864 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH17Q12864 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.24■□□□□ 0.51
CDH17Q12864 AL136038.4-201ENST00000603606 1261 ntBASIC18.24■□□□□ 0.51
CDH17Q12864 AC139887.4-201ENST00000607877 719 ntBASIC18.24■□□□□ 0.51
CDH17Q12864 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 AC011558.1-201ENST00000623459 338 ntBASIC18.24■□□□□ 0.51
CDH17Q12864 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH17Q12864 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH17Q12864 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.24■□□□□ 0.51
CDH17Q12864 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms