Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.8□□□□□ -0.36
RPL39P62891 KRT18P55-202ENST00000578578 1546 ntBASIC12.8□□□□□ -0.36
RPL39P62891 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.8□□□□□ -0.36
RPL39P62891 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
RPL39P62891 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.8□□□□□ -0.36
RPL39P62891 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RPL39P62891 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
RPL39P62891 AC091390.4-202ENST00000476426 537 ntBASIC12.8□□□□□ -0.36
RPL39P62891 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.8□□□□□ -0.36
RPL39P62891 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.8□□□□□ -0.36
RPL39P62891 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.8□□□□□ -0.36
RPL39P62891 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RPL39P62891 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RPL39P62891 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RPL39P62891 UBALD1-205ENST00000590891 2641 ntBASIC12.79□□□□□ -0.36
RPL39P62891 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RPL39P62891 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.79□□□□□ -0.36
RPL39P62891 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RPL39P62891 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RPL39P62891 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.79□□□□□ -0.36
RPL39P62891 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.79□□□□□ -0.36
RPL39P62891 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.79□□□□□ -0.36
RPL39P62891 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.79□□□□□ -0.36
RPL39P62891 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.79□□□□□ -0.36
RPL39P62891 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 AL137784.2-201ENST00000607332 1000 ntBASIC12.79□□□□□ -0.36
RPL39P62891 AL445675.2-201ENST00000620291 557 ntBASIC12.79□□□□□ -0.36
RPL39P62891 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.79□□□□□ -0.36
RPL39P62891 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.79□□□□□ -0.36
RPL39P62891 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RPL39P62891 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RPL39P62891 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RPL39P62891 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RPL39P62891 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.79□□□□□ -0.36
RPL39P62891 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RPL39P62891 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RPL39P62891 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RPL39P62891 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
RPL39P62891 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RPL39P62891 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.78□□□□□ -0.36
RPL39P62891 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RPL39P62891 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.78□□□□□ -0.36
RPL39P62891 AC004980.1-204ENST00000429707 299 ntBASIC12.78□□□□□ -0.36
RPL39P62891 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RPL39P62891 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.78□□□□□ -0.36
RPL39P62891 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.78□□□□□ -0.36
RPL39P62891 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.78□□□□□ -0.36
RPL39P62891 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.78□□□□□ -0.36
RPL39P62891 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.78□□□□□ -0.36
RPL39P62891 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.78□□□□□ -0.36
RPL39P62891 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.78□□□□□ -0.36
RPL39P62891 AL138781.1-201ENST00000566567 1274 ntBASIC12.78□□□□□ -0.36
RPL39P62891 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RPL39P62891 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.78□□□□□ -0.36
RPL39P62891 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.78□□□□□ -0.36
RPL39P62891 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.78□□□□□ -0.36
RPL39P62891 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.78□□□□□ -0.36
RPL39P62891 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.78□□□□□ -0.36
RPL39P62891 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.78□□□□□ -0.36
RPL39P62891 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
RPL39P62891 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RPL39P62891 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms