Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC110285.5-201ENST00000611501 352 ntBASIC16.48■□□□□ 0.23
CXCR4P61073 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.48■□□□□ 0.23
CXCR4P61073 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.48■□□□□ 0.23
CXCR4P61073 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CXCR4P61073 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.48■□□□□ 0.23
CXCR4P61073 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.47■□□□□ 0.23
CXCR4P61073 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.47■□□□□ 0.23
CXCR4P61073 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.47■□□□□ 0.23
CXCR4P61073 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CXCR4P61073 SDHAP2-201ENST00000455183 2001 ntBASIC16.47■□□□□ 0.23
CXCR4P61073 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.47■□□□□ 0.23
CXCR4P61073 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.47■□□□□ 0.23
CXCR4P61073 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CXCR4P61073 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.47■□□□□ 0.23
CXCR4P61073 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.47■□□□□ 0.23
CXCR4P61073 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.47■□□□□ 0.23
CXCR4P61073 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.47■□□□□ 0.23
CXCR4P61073 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.47■□□□□ 0.23
CXCR4P61073 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.47■□□□□ 0.23
CXCR4P61073 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CXCR4P61073 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.47■□□□□ 0.23
CXCR4P61073 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CXCR4P61073 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXCR4P61073 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCR4P61073 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CXCR4P61073 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CXCR4P61073 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.46■□□□□ 0.23
CXCR4P61073 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CXCR4P61073 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCR4P61073 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CXCR4P61073 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCR4P61073 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
CXCR4P61073 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCR4P61073 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCR4P61073 AC004951.3-201ENST00000418645 1148 ntBASIC16.46■□□□□ 0.23
CXCR4P61073 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.46■□□□□ 0.23
CXCR4P61073 AC133681.1-201ENST00000465482 601 ntBASIC16.46■□□□□ 0.23
CXCR4P61073 AP002982.1-201ENST00000492365 877 ntBASIC16.46■□□□□ 0.23
CXCR4P61073 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCR4P61073 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.46■□□□□ 0.23
CXCR4P61073 PCDHB19P-201ENST00000570871 2371 ntBASIC16.46■□□□□ 0.23
CXCR4P61073 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CXCR4P61073 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CXCR4P61073 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCR4P61073 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.46■□□□□ 0.23
CXCR4P61073 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.22
CXCR4P61073 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CXCR4P61073 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CXCR4P61073 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CXCR4P61073 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CXCR4P61073 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CXCR4P61073 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CXCR4P61073 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CXCR4P61073 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CXCR4P61073 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms