Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH13P55290 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDH13P55290 KRT18P55-202ENST00000578578 1546 ntBASIC17.69■□□□□ 0.42
CDH13P55290 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
CDH13P55290 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.69■□□□□ 0.42
CDH13P55290 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 EGLN1P1-201ENST00000531623 762 ntBASIC17.69■□□□□ 0.42
CDH13P55290 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 MIR3180-4-201ENST00000582223 153 ntBASIC17.69■□□□□ 0.42
CDH13P55290 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 AC024243.1-201ENST00000609234 778 ntBASIC17.69■□□□□ 0.42
CDH13P55290 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH13P55290 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CDH13P55290 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH13P55290 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH13P55290 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH13P55290 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH13P55290 PP12613-201ENST00000424958 2230 ntBASIC17.68■□□□□ 0.42
CDH13P55290 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH13P55290 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH13P55290 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDH13P55290 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH13P55290 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.68■□□□□ 0.42
CDH13P55290 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH13P55290 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CDH13P55290 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH13P55290 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH13P55290 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.68■□□□□ 0.42
CDH13P55290 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH13P55290 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH13P55290 AC010947.1-201ENST00000623454 693 ntBASIC17.68■□□□□ 0.42
CDH13P55290 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH13P55290 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH13P55290 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH13P55290 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH13P55290 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.68■□□□□ 0.42
CDH13P55290 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH13P55290 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH13P55290 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CDH13P55290 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 AC139713.2-201ENST00000641328 2723 ntBASIC17.67■□□□□ 0.42
CDH13P55290 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CDH13P55290 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDH13P55290 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CDH13P55290 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CDH13P55290 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 AC009947.2-201ENST00000444014 672 ntBASIC17.67■□□□□ 0.42
CDH13P55290 SEC1P-202ENST00000473944 940 ntBASIC17.67■□□□□ 0.42
CDH13P55290 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH13P55290 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH13P55290 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH13P55290 MIR4497-201ENST00000583208 89 ntBASIC17.67■□□□□ 0.42
CDH13P55290 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.67■□□□□ 0.42
CDH13P55290 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDH13P55290 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
CDH13P55290 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH13P55290 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CDH13P55290 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH13P55290 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
CDH13P55290 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH13P55290 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.66■□□□□ 0.42
CDH13P55290 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CDH13P55290 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH13P55290 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CDH13P55290 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CDH13P55290 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms