Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.7■□□□□ 0.1
ATP1B3P54709 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.7■□□□□ 0.1
ATP1B3P54709 C2orf69P3-201ENST00000565542 1120 ntBASIC15.7■□□□□ 0.1
ATP1B3P54709 WWOX-216ENST00000569818 525 ntBASIC15.7■□□□□ 0.1
ATP1B3P54709 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.7■□□□□ 0.1
ATP1B3P54709 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 AP006294.2-201ENST00000641667 209 ntBASIC15.7■□□□□ 0.1
ATP1B3P54709 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.7■□□□□ 0.1
ATP1B3P54709 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.7■□□□□ 0.1
ATP1B3P54709 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 KRT17P2-201ENST00000300992 1314 ntBASIC15.69■□□□□ 0.1
ATP1B3P54709 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 AC084018.2-201ENST00000613093 2607 ntBASIC15.69■□□□□ 0.1
ATP1B3P54709 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.69■□□□□ 0.1
ATP1B3P54709 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.69■□□□□ 0.1
ATP1B3P54709 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ATP1B3P54709 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.69■□□□□ 0.1
ATP1B3P54709 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 TSPY7P-201ENST00000431358 1114 ntBASIC15.69■□□□□ 0.1
ATP1B3P54709 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ATP1B3P54709 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.69■□□□□ 0.1
ATP1B3P54709 FITM1-202ENST00000559294 800 ntBASIC15.69■□□□□ 0.1
ATP1B3P54709 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.69■□□□□ 0.1
ATP1B3P54709 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.69■□□□□ 0.1
ATP1B3P54709 CR769767.2-201ENST00000622735 460 ntBASIC15.69■□□□□ 0.1
ATP1B3P54709 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.69■□□□□ 0.1
ATP1B3P54709 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.69■□□□□ 0.1
ATP1B3P54709 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.69■□□□□ 0.1
ATP1B3P54709 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.69■□□□□ 0.1
ATP1B3P54709 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ATP1B3P54709 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ATP1B3P54709 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP1B3P54709 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.69■□□□□ 0.1
ATP1B3P54709 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
ATP1B3P54709 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.68■□□□□ 0.1
ATP1B3P54709 AL096828.2-201ENST00000567259 1965 ntBASIC15.68■□□□□ 0.1
ATP1B3P54709 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ATP1B3P54709 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.68■□□□□ 0.1
ATP1B3P54709 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.68■□□□□ 0.1
ATP1B3P54709 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.68■□□□□ 0.1
ATP1B3P54709 AP000525.1-201ENST00000608286 694 ntBASIC15.68■□□□□ 0.1
ATP1B3P54709 TMEM191A-211ENST00000637163 1067 ntBASIC15.68■□□□□ 0.1
ATP1B3P54709 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.68■□□□□ 0.1
ATP1B3P54709 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 SDHAP2-201ENST00000455183 2001 ntBASIC15.68■□□□□ 0.1
ATP1B3P54709 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ATP1B3P54709 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
ATP1B3P54709 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP1B3P54709 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.68■□□□□ 0.1
ATP1B3P54709 AC092338.2-201ENST00000568827 1415 ntBASIC15.68■□□□□ 0.1
ATP1B3P54709 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP1B3P54709 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATP1B3P54709 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATP1B3P54709 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.67■□□□□ 0.1
ATP1B3P54709 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ATP1B3P54709 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP1B3P54709 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP1B3P54709 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms