Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ATN1P54259 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.84■□□□□ 0.77
ATN1P54259 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
ATN1P54259 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ATN1P54259 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.84■□□□□ 0.77
ATN1P54259 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ATN1P54259 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.84■□□□□ 0.77
ATN1P54259 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.84■□□□□ 0.77
ATN1P54259 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.84■□□□□ 0.77
ATN1P54259 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.84■□□□□ 0.77
ATN1P54259 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.84■□□□□ 0.77
ATN1P54259 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.84■□□□□ 0.77
ATN1P54259 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.84■□□□□ 0.77
ATN1P54259 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.84■□□□□ 0.77
ATN1P54259 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.84■□□□□ 0.77
ATN1P54259 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ATN1P54259 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATN1P54259 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ATN1P54259 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.84■□□□□ 0.77
ATN1P54259 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
ATN1P54259 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATN1P54259 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATN1P54259 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATN1P54259 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATN1P54259 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATN1P54259 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ATN1P54259 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.83■□□□□ 0.77
ATN1P54259 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.83■□□□□ 0.77
ATN1P54259 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.83■□□□□ 0.77
ATN1P54259 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
ATN1P54259 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATN1P54259 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATN1P54259 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATN1P54259 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATN1P54259 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATN1P54259 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATN1P54259 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATN1P54259 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATN1P54259 CRYGEP-201ENST00000412192 528 ntBASIC19.83■□□□□ 0.77
ATN1P54259 AC007967.3-201ENST00000434308 558 ntBASIC19.83■□□□□ 0.77
ATN1P54259 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.83■□□□□ 0.77
ATN1P54259 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.83■□□□□ 0.77
ATN1P54259 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.83■□□□□ 0.77
ATN1P54259 AC011467.4-201ENST00000594891 528 ntBASIC19.83■□□□□ 0.77
ATN1P54259 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.83■□□□□ 0.77
ATN1P54259 AL513190.1-201ENST00000621254 727 ntBASIC19.83■□□□□ 0.77
ATN1P54259 C20orf181-201ENST00000623918 480 ntBASIC19.83■□□□□ 0.77
ATN1P54259 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.83■□□□□ 0.76
ATN1P54259 AL032819.2-201ENST00000624543 2162 ntBASIC19.83■□□□□ 0.76
ATN1P54259 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.82■□□□□ 0.76
ATN1P54259 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.82■□□□□ 0.76
ATN1P54259 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.82■□□□□ 0.76
ATN1P54259 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATN1P54259 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.82■□□□□ 0.76
ATN1P54259 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.82■□□□□ 0.76
ATN1P54259 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
ATN1P54259 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC19.82■□□□□ 0.76
ATN1P54259 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.82■□□□□ 0.76
ATN1P54259 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.82■□□□□ 0.76
ATN1P54259 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ATN1P54259 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
ATN1P54259 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.82■□□□□ 0.76
ATN1P54259 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATN1P54259 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATN1P54259 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATN1P54259 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
ATN1P54259 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATN1P54259 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATN1P54259 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATN1P54259 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATN1P54259 CEND1P1-201ENST00000451006 455 ntBASIC19.81■□□□□ 0.76
ATN1P54259 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.81■□□□□ 0.76
ATN1P54259 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.81■□□□□ 0.76
ATN1P54259 MIR4751-201ENST00000578027 74 ntBASIC19.81■□□□□ 0.76
ATN1P54259 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATN1P54259 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.81■□□□□ 0.76
ATN1P54259 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms