Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.79■□□□□ 0.76
CLCN3P51790 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.79■□□□□ 0.76
CLCN3P51790 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.79■□□□□ 0.76
CLCN3P51790 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.79■□□□□ 0.76
CLCN3P51790 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CLCN3P51790 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.79■□□□□ 0.76
CLCN3P51790 AP001269.4-201ENST00000609611 512 ntBASIC19.79■□□□□ 0.76
CLCN3P51790 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
CLCN3P51790 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.79■□□□□ 0.76
CLCN3P51790 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCN3P51790 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLCN3P51790 AL096828.2-201ENST00000567259 1965 ntBASIC19.79■□□□□ 0.76
CLCN3P51790 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CLCN3P51790 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN3P51790 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN3P51790 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN3P51790 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.78■□□□□ 0.76
CLCN3P51790 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.78■□□□□ 0.76
CLCN3P51790 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN3P51790 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN3P51790 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN3P51790 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.78■□□□□ 0.76
CLCN3P51790 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLCN3P51790 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.78■□□□□ 0.76
CLCN3P51790 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN3P51790 AP000347.1-202ENST00000435868 847 ntBASIC19.78■□□□□ 0.76
CLCN3P51790 AC079776.4-201ENST00000511039 504 ntBASIC19.78■□□□□ 0.76
CLCN3P51790 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CLCN3P51790 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.78■□□□□ 0.76
CLCN3P51790 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLCN3P51790 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.78■□□□□ 0.76
CLCN3P51790 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.78■□□□□ 0.76
CLCN3P51790 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CLCN3P51790 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN3P51790 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CLCN3P51790 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.78■□□□□ 0.76
CLCN3P51790 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLCN3P51790 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN3P51790 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN3P51790 AC135776.1-201ENST00000319817 2481 ntBASIC19.78■□□□□ 0.76
CLCN3P51790 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.78■□□□□ 0.76
CLCN3P51790 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.78■□□□□ 0.76
CLCN3P51790 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN3P51790 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLCN3P51790 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLCN3P51790 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN3P51790 AC093677.2-201ENST00000600169 1863 ntBASIC19.77■□□□□ 0.76
CLCN3P51790 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.77■□□□□ 0.76
CLCN3P51790 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.77■□□□□ 0.76
CLCN3P51790 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.77■□□□□ 0.76
CLCN3P51790 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLCN3P51790 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN3P51790 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN3P51790 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN3P51790 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN3P51790 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLCN3P51790 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.77■□□□□ 0.76
CLCN3P51790 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.77■□□□□ 0.76
CLCN3P51790 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.77■□□□□ 0.76
CLCN3P51790 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.77■□□□□ 0.76
CLCN3P51790 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.77■□□□□ 0.76
CLCN3P51790 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.77■□□□□ 0.76
CLCN3P51790 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.77■□□□□ 0.76
CLCN3P51790 KRT8P47-201ENST00000604727 1398 ntBASIC19.77■□□□□ 0.76
CLCN3P51790 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN3P51790 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLCN3P51790 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLCN3P51790 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN3P51790 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.77■□□□□ 0.75
CLCN3P51790 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.77■□□□□ 0.75
CLCN3P51790 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLCN3P51790 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.77■□□□□ 0.75
CLCN3P51790 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CLCN3P51790 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLCN3P51790 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLCN3P51790 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.76■□□□□ 0.75
CLCN3P51790 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.76■□□□□ 0.75
CLCN3P51790 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.76■□□□□ 0.75
CLCN3P51790 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms