Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
USP11P51784 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.39■□□□□ 0.85
USP11P51784 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP11P51784 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.38■□□□□ 0.85
USP11P51784 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
USP11P51784 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.38■□□□□ 0.85
USP11P51784 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
USP11P51784 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
USP11P51784 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
USP11P51784 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.38■□□□□ 0.85
USP11P51784 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.38■□□□□ 0.85
USP11P51784 AC012615.1-201ENST00000565797 1299 ntBASIC20.38■□□□□ 0.85
USP11P51784 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.38■□□□□ 0.85
USP11P51784 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
USP11P51784 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.38■□□□□ 0.85
USP11P51784 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.38■□□□□ 0.85
USP11P51784 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP11P51784 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP11P51784 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP11P51784 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
USP11P51784 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.37■□□□□ 0.85
USP11P51784 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP11P51784 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.37■□□□□ 0.85
USP11P51784 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP11P51784 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP11P51784 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP11P51784 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 IGHV3-47-201ENST00000425060 335 ntBASIC20.37■□□□□ 0.85
USP11P51784 KRT17P6-201ENST00000453795 1220 ntBASIC20.37■□□□□ 0.85
USP11P51784 AC091607.1-201ENST00000490318 1060 ntBASIC20.37■□□□□ 0.85
USP11P51784 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP11P51784 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.37■□□□□ 0.85
USP11P51784 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.37■□□□□ 0.85
USP11P51784 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.37■□□□□ 0.85
USP11P51784 AP005901.3-202ENST00000581653 237 ntBASIC20.37■□□□□ 0.85
USP11P51784 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.37■□□□□ 0.85
USP11P51784 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP11P51784 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.37■□□□□ 0.85
USP11P51784 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP11P51784 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.37■□□□□ 0.85
USP11P51784 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
USP11P51784 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP11P51784 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
USP11P51784 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.36■□□□□ 0.85
USP11P51784 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
USP11P51784 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.36■□□□□ 0.85
USP11P51784 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.36■□□□□ 0.85
USP11P51784 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
USP11P51784 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.36■□□□□ 0.85
USP11P51784 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.36■□□□□ 0.85
USP11P51784 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
USP11P51784 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
USP11P51784 KRT18P55-202ENST00000578578 1546 ntBASIC20.36■□□□□ 0.85
USP11P51784 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.36■□□□□ 0.85
USP11P51784 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
USP11P51784 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP11P51784 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.35■□□□□ 0.85
USP11P51784 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.35■□□□□ 0.85
USP11P51784 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP11P51784 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
USP11P51784 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.35■□□□□ 0.85
USP11P51784 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP11P51784 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.35■□□□□ 0.85
USP11P51784 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms