Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MRE11P49959 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MRE11P49959 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MRE11P49959 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MRE11P49959 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.05■□□□□ 0.96
MRE11P49959 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.05■□□□□ 0.96
MRE11P49959 TSPY21P-201ENST00000433481 731 ntBASIC21.05■□□□□ 0.96
MRE11P49959 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
MRE11P49959 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.05■□□□□ 0.96
MRE11P49959 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.05■□□□□ 0.96
MRE11P49959 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.05■□□□□ 0.96
MRE11P49959 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.05■□□□□ 0.96
MRE11P49959 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.05■□□□□ 0.96
MRE11P49959 AC006557.6-201ENST00000623071 864 ntBASIC21.05■□□□□ 0.96
MRE11P49959 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MRE11P49959 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MRE11P49959 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MRE11P49959 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.05■□□□□ 0.96
MRE11P49959 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
MRE11P49959 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MRE11P49959 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.05■□□□□ 0.96
MRE11P49959 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MRE11P49959 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MRE11P49959 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MRE11P49959 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MRE11P49959 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.04■□□□□ 0.96
MRE11P49959 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MRE11P49959 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MRE11P49959 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.04■□□□□ 0.96
MRE11P49959 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MRE11P49959 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
MRE11P49959 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MRE11P49959 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 UPK3BP1-201ENST00000428678 509 ntBASIC21.04■□□□□ 0.96
MRE11P49959 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.04■□□□□ 0.96
MRE11P49959 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.04■□□□□ 0.96
MRE11P49959 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.04■□□□□ 0.96
MRE11P49959 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MRE11P49959 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.04■□□□□ 0.96
MRE11P49959 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MRE11P49959 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MRE11P49959 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.04■□□□□ 0.96
MRE11P49959 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.04■□□□□ 0.96
MRE11P49959 AC124283.5-201ENST00000624661 1809 ntBASIC21.04■□□□□ 0.96
MRE11P49959 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.04■□□□□ 0.96
MRE11P49959 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.04■□□□□ 0.96
MRE11P49959 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRE11P49959 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MRE11P49959 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MRE11P49959 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.03■□□□□ 0.96
MRE11P49959 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MRE11P49959 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
MRE11P49959 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 KRT18P57-201ENST00000443599 1254 ntBASIC21.03■□□□□ 0.96
MRE11P49959 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.03■□□□□ 0.96
MRE11P49959 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 MIR6786-201ENST00000616843 113 ntBASIC21.03■□□□□ 0.96
MRE11P49959 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.03■□□□□ 0.96
MRE11P49959 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.03■□□□□ 0.96
MRE11P49959 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MRE11P49959 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 RCC2P6-201ENST00000526625 1557 ntBASIC21.02■□□□□ 0.96
MRE11P49959 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
MRE11P49959 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
MRE11P49959 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.02■□□□□ 0.96
MRE11P49959 KRT18P56-201ENST00000507275 550 ntBASIC21.02■□□□□ 0.96
MRE11P49959 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.02■□□□□ 0.96
MRE11P49959 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 AC145285.6-201ENST00000604632 637 ntBASIC21.02■□□□□ 0.96
MRE11P49959 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms