Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2AP49459 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2AP49459 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
UBE2AP49459 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2AP49459 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2AP49459 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2AP49459 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 AC008556.1-201ENST00000610908 2040 ntBASIC11.48□□□□□ -0.57
UBE2AP49459 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2AP49459 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2AP49459 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
UBE2AP49459 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2AP49459 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2AP49459 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2AP49459 AP000593.1-201ENST00000393668 712 ntBASIC11.48□□□□□ -0.57
UBE2AP49459 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 CCR12P-201ENST00000446203 998 ntBASIC11.48□□□□□ -0.57
UBE2AP49459 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2AP49459 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2AP49459 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2AP49459 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC11.48□□□□□ -0.57
UBE2AP49459 KRT17P2-201ENST00000300992 1314 ntBASIC11.48□□□□□ -0.57
UBE2AP49459 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 KRT8P45-201ENST00000414328 1447 ntBASIC11.48□□□□□ -0.57
UBE2AP49459 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2AP49459 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2AP49459 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UBE2AP49459 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
UBE2AP49459 AC034236.2-201ENST00000606662 1610 ntBASIC11.48□□□□□ -0.57
UBE2AP49459 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
UBE2AP49459 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2AP49459 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 AL499627.1-201ENST00000569373 2188 ntBASIC11.48□□□□□ -0.57
UBE2AP49459 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UBE2AP49459 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2AP49459 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2AP49459 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2AP49459 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UBE2AP49459 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
UBE2AP49459 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC11.47□□□□□ -0.57
UBE2AP49459 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC11.47□□□□□ -0.57
UBE2AP49459 BICD1-207ENST00000551848 1962 ntBASIC11.47□□□□□ -0.57
UBE2AP49459 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 MYLKP1-201ENST00000509077 1580 ntBASIC11.47□□□□□ -0.57
UBE2AP49459 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
UBE2AP49459 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2AP49459 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2AP49459 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.47□□□□□ -0.57
UBE2AP49459 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 HIST1H2APS4-201ENST00000362070 348 ntBASIC11.47□□□□□ -0.57
UBE2AP49459 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC11.47□□□□□ -0.57
UBE2AP49459 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2AP49459 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC11.47□□□□□ -0.57
UBE2AP49459 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
UBE2AP49459 AL023284.2-201ENST00000405850 579 ntBASIC11.47□□□□□ -0.57
UBE2AP49459 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC11.47□□□□□ -0.57
UBE2AP49459 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2AP49459 C2orf69P3-201ENST00000565542 1120 ntBASIC11.47□□□□□ -0.57
UBE2AP49459 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 MIR3180-5-201ENST00000583743 153 ntBASIC11.47□□□□□ -0.57
UBE2AP49459 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms