Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC34P49427 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.3□□□□□ -0.12
CDC34P49427 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDC34P49427 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC34P49427 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC34P49427 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC34P49427 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDC34P49427 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.3□□□□□ -0.12
CDC34P49427 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC34P49427 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.29□□□□□ -0.12
CDC34P49427 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC34P49427 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.29□□□□□ -0.12
CDC34P49427 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC34P49427 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.29□□□□□ -0.12
CDC34P49427 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.29□□□□□ -0.12
CDC34P49427 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC34P49427 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 SOX15-203ENST00000570788 1093 ntBASIC14.29□□□□□ -0.12
CDC34P49427 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.29□□□□□ -0.12
CDC34P49427 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDC34P49427 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 AC092437.1-201ENST00000624794 1048 ntBASIC14.29□□□□□ -0.12
CDC34P49427 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.29□□□□□ -0.12
CDC34P49427 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC34P49427 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
CDC34P49427 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDC34P49427 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDC34P49427 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC34P49427 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.28□□□□□ -0.12
CDC34P49427 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
CDC34P49427 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC34P49427 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC34P49427 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC34P49427 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC34P49427 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 NBPF21P-201ENST00000425093 1451 ntBASIC14.28□□□□□ -0.12
CDC34P49427 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC34P49427 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.28□□□□□ -0.12
CDC34P49427 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.28□□□□□ -0.12
CDC34P49427 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CDC34P49427 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC34P49427 AL050303.2-201ENST00000619798 666 ntBASIC14.28□□□□□ -0.12
CDC34P49427 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDC34P49427 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC34P49427 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CDC34P49427 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDC34P49427 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CDC34P49427 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC34P49427 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC34P49427 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC34P49427 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDC34P49427 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CDC34P49427 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC34P49427 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDC34P49427 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC34P49427 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDC34P49427 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.27□□□□□ -0.12
CDC34P49427 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CDC34P49427 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.27□□□□□ -0.12
CDC34P49427 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms