Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 COX5BP2-201ENST00000392354 334 ntBASIC20.48■□□□□ 0.87
TM4SF4P48230 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.48■□□□□ 0.87
TM4SF4P48230 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.48■□□□□ 0.87
TM4SF4P48230 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.48■□□□□ 0.87
TM4SF4P48230 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.48■□□□□ 0.87
TM4SF4P48230 OR7E47P-204ENST00000575924 449 ntBASIC20.48■□□□□ 0.87
TM4SF4P48230 AC015911.4-201ENST00000588022 1070 ntBASIC20.48■□□□□ 0.87
TM4SF4P48230 AL390955.2-201ENST00000603032 514 ntBASIC20.48■□□□□ 0.87
TM4SF4P48230 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TM4SF4P48230 LINC00628-201ENST00000628516 1289 ntBASIC20.48■□□□□ 0.87
TM4SF4P48230 AC007064.4-201ENST00000637740 555 ntBASIC20.48■□□□□ 0.87
TM4SF4P48230 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.48■□□□□ 0.87
TM4SF4P48230 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.48■□□□□ 0.87
TM4SF4P48230 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
TM4SF4P48230 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TM4SF4P48230 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF4P48230 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.47■□□□□ 0.87
TM4SF4P48230 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TM4SF4P48230 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF4P48230 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.47■□□□□ 0.87
TM4SF4P48230 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF4P48230 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF4P48230 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF4P48230 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF4P48230 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TM4SF4P48230 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF4P48230 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.47■□□□□ 0.87
TM4SF4P48230 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.47■□□□□ 0.87
TM4SF4P48230 AC093520.2-201ENST00000561830 333 ntBASIC20.47■□□□□ 0.87
TM4SF4P48230 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.47■□□□□ 0.87
TM4SF4P48230 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.47■□□□□ 0.87
TM4SF4P48230 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF4P48230 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TM4SF4P48230 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF4P48230 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TM4SF4P48230 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.47■□□□□ 0.87
TM4SF4P48230 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF4P48230 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.47■□□□□ 0.87
TM4SF4P48230 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.47■□□□□ 0.87
TM4SF4P48230 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TM4SF4P48230 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.47■□□□□ 0.87
TM4SF4P48230 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TM4SF4P48230 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TM4SF4P48230 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TM4SF4P48230 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.46■□□□□ 0.87
TM4SF4P48230 AC148477.5-201ENST00000625164 1645 ntBASIC20.46■□□□□ 0.87
TM4SF4P48230 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TM4SF4P48230 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TM4SF4P48230 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TM4SF4P48230 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TM4SF4P48230 AC023141.5-201ENST00000458585 616 ntBASIC20.46■□□□□ 0.87
TM4SF4P48230 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.46■□□□□ 0.87
TM4SF4P48230 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TM4SF4P48230 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TM4SF4P48230 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.46■□□□□ 0.87
TM4SF4P48230 AC022145.2-201ENST00000598203 171 ntBASIC20.46■□□□□ 0.87
TM4SF4P48230 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.46■□□□□ 0.87
TM4SF4P48230 AC023141.13-201ENST00000604991 943 ntBASIC20.46■□□□□ 0.87
TM4SF4P48230 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.46■□□□□ 0.87
TM4SF4P48230 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TM4SF4P48230 REXO1L3P-201ENST00000622202 1288 ntBASIC20.46■□□□□ 0.87
TM4SF4P48230 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.46■□□□□ 0.87
TM4SF4P48230 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.46■□□□□ 0.87
TM4SF4P48230 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TM4SF4P48230 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TM4SF4P48230 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
TM4SF4P48230 AC132938.5-201ENST00000624980 1813 ntBASIC20.46■□□□□ 0.87
TM4SF4P48230 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TM4SF4P48230 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.45■□□□□ 0.86
TM4SF4P48230 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TM4SF4P48230 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM4SF4P48230 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TM4SF4P48230 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TM4SF4P48230 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM4SF4P48230 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TM4SF4P48230 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.45■□□□□ 0.86
TM4SF4P48230 GK-202ENST00000378941 458 ntTSL 3 BASIC20.45■□□□□ 0.86
TM4SF4P48230 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TM4SF4P48230 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TM4SF4P48230 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.45■□□□□ 0.86
TM4SF4P48230 FAM86GP-201ENST00000448322 971 ntBASIC20.45■□□□□ 0.86
TM4SF4P48230 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.45■□□□□ 0.86
TM4SF4P48230 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.45■□□□□ 0.86
TM4SF4P48230 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM4SF4P48230 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.45■□□□□ 0.86
TM4SF4P48230 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.45■□□□□ 0.86
TM4SF4P48230 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.45■□□□□ 0.86
TM4SF4P48230 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.45■□□□□ 0.86
TM4SF4P48230 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TM4SF4P48230 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.45■□□□□ 0.86
TM4SF4P48230 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.45■□□□□ 0.86
TM4SF4P48230 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.45■□□□□ 0.86
TM4SF4P48230 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.45■□□□□ 0.86
TM4SF4P48230 GGTLC5P-201ENST00000617623 998 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms