Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MMP13P45452 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP13P45452 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.81■□□□□ 0.6
MMP13P45452 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP13P45452 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.8■□□□□ 0.6
MMP13P45452 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 AL163051.1-201ENST00000569214 1512 ntBASIC18.8■□□□□ 0.6
MMP13P45452 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
MMP13P45452 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
MMP13P45452 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
MMP13P45452 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.8■□□□□ 0.6
MMP13P45452 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 RCN1P1-201ENST00000400413 996 ntBASIC18.8■□□□□ 0.6
MMP13P45452 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.8■□□□□ 0.6
MMP13P45452 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.8■□□□□ 0.6
MMP13P45452 AC010240.3-201ENST00000607688 395 ntBASIC18.8■□□□□ 0.6
MMP13P45452 AC139887.4-201ENST00000607877 719 ntBASIC18.8■□□□□ 0.6
MMP13P45452 AL031432.5-201ENST00000641059 760 ntBASIC18.8■□□□□ 0.6
MMP13P45452 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.8■□□□□ 0.6
MMP13P45452 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
MMP13P45452 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.8■□□□□ 0.6
MMP13P45452 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
MMP13P45452 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP13P45452 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP13P45452 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MMP13P45452 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 REXO1L9P-201ENST00000604264 2108 ntBASIC18.79■□□□□ 0.6
MMP13P45452 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP13P45452 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.79■□□□□ 0.6
MMP13P45452 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.79■□□□□ 0.6
MMP13P45452 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP13P45452 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP13P45452 GCSHP2-201ENST00000560971 527 ntBASIC18.79■□□□□ 0.6
MMP13P45452 MIR3180-4-201ENST00000582223 153 ntBASIC18.79■□□□□ 0.6
MMP13P45452 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
MMP13P45452 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.79■□□□□ 0.6
MMP13P45452 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
MMP13P45452 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP13P45452 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.78■□□□□ 0.6
MMP13P45452 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.78■□□□□ 0.6
MMP13P45452 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.78■□□□□ 0.6
MMP13P45452 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.78■□□□□ 0.6
MMP13P45452 AC117947.1-201ENST00000427448 529 ntBASIC18.78■□□□□ 0.6
MMP13P45452 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.78■□□□□ 0.6
MMP13P45452 YBX1P2-201ENST00000489612 999 ntBASIC18.78■□□□□ 0.6
MMP13P45452 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.78■□□□□ 0.6
MMP13P45452 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 AC009065.1-201ENST00000564055 1225 ntBASIC18.78■□□□□ 0.6
MMP13P45452 RN7SL850P-201ENST00000579959 291 ntBASIC18.78■□□□□ 0.6
MMP13P45452 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 AC084018.2-201ENST00000613093 2607 ntBASIC18.78■□□□□ 0.6
MMP13P45452 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP13P45452 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MMP13P45452 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP13P45452 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MMP13P45452 AC141586.5-201ENST00000624546 2050 ntBASIC18.77■□□□□ 0.6
MMP13P45452 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP13P45452 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.77■□□□□ 0.6
MMP13P45452 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP13P45452 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.77■□□□□ 0.6
MMP13P45452 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.77■□□□□ 0.6
MMP13P45452 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP13P45452 AL441883.1-201ENST00000566170 1045 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms