Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
HTTP42858 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.19■□□□□ 0.82
HTTP42858 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTTP42858 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.19■□□□□ 0.82
HTTP42858 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HTTP42858 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTTP42858 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.19■□□□□ 0.82
HTTP42858 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.19■□□□□ 0.82
HTTP42858 AC010654.1-201ENST00000615722 808 ntBASIC20.19■□□□□ 0.82
HTTP42858 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.19■□□□□ 0.82
HTTP42858 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTTP42858 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.19■□□□□ 0.82
HTTP42858 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HTTP42858 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTTP42858 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTTP42858 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.18■□□□□ 0.82
HTTP42858 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HTTP42858 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTTP42858 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HTTP42858 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.18■□□□□ 0.82
HTTP42858 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.18■□□□□ 0.82
HTTP42858 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.18■□□□□ 0.82
HTTP42858 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTTP42858 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
HTTP42858 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.18■□□□□ 0.82
HTTP42858 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
HTTP42858 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HTTP42858 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTTP42858 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.18■□□□□ 0.82
HTTP42858 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.18■□□□□ 0.82
HTTP42858 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.18■□□□□ 0.82
HTTP42858 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.18■□□□□ 0.82
HTTP42858 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTTP42858 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.18■□□□□ 0.82
HTTP42858 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HTTP42858 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HTTP42858 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTTP42858 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.17■□□□□ 0.82
HTTP42858 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.17■□□□□ 0.82
HTTP42858 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.17■□□□□ 0.82
HTTP42858 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HTTP42858 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTTP42858 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTTP42858 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.17■□□□□ 0.82
HTTP42858 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.17■□□□□ 0.82
HTTP42858 AC093214.1-201ENST00000511688 1107 ntBASIC20.17■□□□□ 0.82
HTTP42858 AP005018.1-201ENST00000525475 301 ntBASIC20.17■□□□□ 0.82
HTTP42858 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.17■□□□□ 0.82
HTTP42858 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.17■□□□□ 0.82
HTTP42858 AC004877.2-201ENST00000623941 599 ntBASIC20.17■□□□□ 0.82
HTTP42858 LINC00628-201ENST00000628516 1289 ntBASIC20.17■□□□□ 0.82
HTTP42858 AC105339.1-204ENST00000636249 355 ntBASIC20.17■□□□□ 0.82
HTTP42858 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTTP42858 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
HTTP42858 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.17■□□□□ 0.82
HTTP42858 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.17■□□□□ 0.82
HTTP42858 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTTP42858 MRPL20P1-201ENST00000400819 433 ntBASIC20.17■□□□□ 0.82
HTTP42858 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.17■□□□□ 0.82
HTTP42858 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HTTP42858 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTTP42858 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HTTP42858 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.17■□□□□ 0.82
HTTP42858 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.17■□□□□ 0.82
HTTP42858 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HTTP42858 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.16■□□□□ 0.82
HTTP42858 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HTTP42858 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.16■□□□□ 0.82
HTTP42858 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.16■□□□□ 0.82
HTTP42858 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.16■□□□□ 0.82
HTTP42858 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.16■□□□□ 0.82
HTTP42858 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.16■□□□□ 0.82
HTTP42858 RHOQP3-201ENST00000437982 621 ntBASIC20.16■□□□□ 0.82
HTTP42858 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.16■□□□□ 0.82
HTTP42858 KRT18P65-201ENST00000439811 1286 ntBASIC20.16■□□□□ 0.82
HTTP42858 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.16■□□□□ 0.82
HTTP42858 AC069262.1-201ENST00000539058 672 ntBASIC20.16■□□□□ 0.82
HTTP42858 AD001527.2-201ENST00000622994 785 ntBASIC20.16■□□□□ 0.82
HTTP42858 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.16■□□□□ 0.82
HTTP42858 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HTTP42858 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HTTP42858 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
HTTP42858 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HTTP42858 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.16■□□□□ 0.82
HTTP42858 LINC01126-201ENST00000623515 1646 ntBASIC20.15■□□□□ 0.82
HTTP42858 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTTP42858 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.15■□□□□ 0.82
HTTP42858 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms