Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.76■□□□□ 0.11
GDNFP39905 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
GDNFP39905 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
GDNFP39905 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
GDNFP39905 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.76■□□□□ 0.11
GDNFP39905 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GDNFP39905 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GDNFP39905 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.76■□□□□ 0.11
GDNFP39905 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.76■□□□□ 0.11
GDNFP39905 CR392000.1-201ENST00000624770 1228 ntBASIC15.76■□□□□ 0.11
GDNFP39905 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
GDNFP39905 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
GDNFP39905 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.76■□□□□ 0.11
GDNFP39905 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
GDNFP39905 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GDNFP39905 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.76■□□□□ 0.11
GDNFP39905 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
GDNFP39905 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GDNFP39905 AL121761.2-201ENST00000598007 1648 ntBASIC15.76■□□□□ 0.11
GDNFP39905 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.75■□□□□ 0.11
GDNFP39905 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.75■□□□□ 0.11
GDNFP39905 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 MYLKP1-201ENST00000509077 1580 ntBASIC15.75■□□□□ 0.11
GDNFP39905 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
GDNFP39905 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.75■□□□□ 0.11
GDNFP39905 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.75■□□□□ 0.11
GDNFP39905 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
GDNFP39905 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
GDNFP39905 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 KSR1P1-201ENST00000446298 240 ntBASIC15.75■□□□□ 0.11
GDNFP39905 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.75■□□□□ 0.11
GDNFP39905 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.75■□□□□ 0.11
GDNFP39905 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.75■□□□□ 0.11
GDNFP39905 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.75■□□□□ 0.11
GDNFP39905 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
GDNFP39905 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
GDNFP39905 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
GDNFP39905 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDNFP39905 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.74■□□□□ 0.11
GDNFP39905 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.74■□□□□ 0.11
GDNFP39905 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.74■□□□□ 0.11
GDNFP39905 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.74■□□□□ 0.11
GDNFP39905 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 FAM197Y1-201ENST00000421178 764 ntBASIC15.74■□□□□ 0.11
GDNFP39905 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.74■□□□□ 0.11
GDNFP39905 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
GDNFP39905 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.74■□□□□ 0.11
GDNFP39905 UBE2SP1-201ENST00000450587 669 ntBASIC15.74■□□□□ 0.11
GDNFP39905 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.74■□□□□ 0.11
GDNFP39905 AC073195.1-201ENST00000607241 877 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms