Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL138831.2-201ENST00000606564 490 ntBASIC18.51■□□□□ 0.55
SLC6A4P31645 IFNL4P1-201ENST00000607083 540 ntBASIC18.51■□□□□ 0.55
SLC6A4P31645 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.51■□□□□ 0.55
SLC6A4P31645 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SLC6A4P31645 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SLC6A4P31645 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
SLC6A4P31645 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC6A4P31645 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC6A4P31645 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLC6A4P31645 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SLC6A4P31645 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A4P31645 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLC6A4P31645 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A4P31645 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A4P31645 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC6A4P31645 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC6A4P31645 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLC6A4P31645 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC6A4P31645 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC6A4P31645 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A4P31645 DUTP2-201ENST00000519164 463 ntBASIC18.5■□□□□ 0.55
SLC6A4P31645 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC6A4P31645 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC6A4P31645 AL121772.3-201ENST00000610840 674 ntBASIC18.5■□□□□ 0.55
SLC6A4P31645 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SLC6A4P31645 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC6A4P31645 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A4P31645 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A4P31645 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A4P31645 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A4P31645 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A4P31645 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A4P31645 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 AC125634.1-201ENST00000438758 1403 ntBASIC18.49■□□□□ 0.55
SLC6A4P31645 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC6A4P31645 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SLC6A4P31645 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC6A4P31645 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC6A4P31645 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC6A4P31645 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.49■□□□□ 0.55
SLC6A4P31645 AC096582.2-201ENST00000510860 516 ntBASIC18.49■□□□□ 0.55
SLC6A4P31645 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC6A4P31645 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC6A4P31645 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.49■□□□□ 0.55
SLC6A4P31645 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 AC091304.2-201ENST00000564639 760 ntBASIC18.49■□□□□ 0.55
SLC6A4P31645 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 KRT8P47-201ENST00000604727 1398 ntBASIC18.49■□□□□ 0.55
SLC6A4P31645 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC6A4P31645 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC6A4P31645 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC6A4P31645 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SLC6A4P31645 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
SLC6A4P31645 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC6A4P31645 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC6A4P31645 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A4P31645 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC6A4P31645 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC6A4P31645 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC6A4P31645 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SLC6A4P31645 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SLC6A4P31645 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC6A4P31645 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.48■□□□□ 0.55
SLC6A4P31645 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC6A4P31645 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC6A4P31645 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC6A4P31645 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 AC111152.3-201ENST00000569699 673 ntBASIC18.48■□□□□ 0.55
SLC6A4P31645 RN7SL510P-201ENST00000581311 263 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms