Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
PTPN6P29350 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
PTPN6P29350 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PTPN6P29350 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PTPN6P29350 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
PTPN6P29350 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN6P29350 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN6P29350 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 FZD10-202ENST00000539839 3282 ntBASIC17.14■□□□□ 0.33
PTPN6P29350 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
PTPN6P29350 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.14■□□□□ 0.33
PTPN6P29350 BX664615.1-201ENST00000443558 458 ntBASIC17.14■□□□□ 0.33
PTPN6P29350 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.14■□□□□ 0.33
PTPN6P29350 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.14■□□□□ 0.33
PTPN6P29350 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.14■□□□□ 0.33
PTPN6P29350 AC141257.4-201ENST00000634557 245 ntBASIC17.14■□□□□ 0.33
PTPN6P29350 AC136944.6-201ENST00000634818 245 ntBASIC17.14■□□□□ 0.33
PTPN6P29350 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN6P29350 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 SIRPAP1-201ENST00000448467 1770 ntBASIC17.14■□□□□ 0.33
PTPN6P29350 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PTPN6P29350 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PTPN6P29350 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PTPN6P29350 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN6P29350 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PTPN6P29350 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PTPN6P29350 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 AC132938.6-201ENST00000623828 1655 ntBASIC17.13■□□□□ 0.33
PTPN6P29350 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN6P29350 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PTPN6P29350 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTPN6P29350 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN6P29350 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PTPN6P29350 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN6P29350 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.13■□□□□ 0.33
PTPN6P29350 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
PTPN6P29350 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN6P29350 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN6P29350 AC104076.2-201ENST00000448912 469 ntBASIC17.13■□□□□ 0.33
PTPN6P29350 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.13■□□□□ 0.33
PTPN6P29350 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTPN6P29350 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN6P29350 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.13■□□□□ 0.33
PTPN6P29350 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.13■□□□□ 0.33
PTPN6P29350 AC006011.2-201ENST00000621313 1158 ntBASIC17.13■□□□□ 0.33
PTPN6P29350 AC112497.1-201ENST00000624824 639 ntBASIC17.13■□□□□ 0.33
PTPN6P29350 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN6P29350 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN6P29350 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTPN6P29350 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN6P29350 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.13■□□□□ 0.33
PTPN6P29350 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN6P29350 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PTPN6P29350 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PTPN6P29350 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN6P29350 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN6P29350 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PTPN6P29350 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
PTPN6P29350 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN6P29350 DUTP2-201ENST00000519164 463 ntBASIC17.12■□□□□ 0.33
PTPN6P29350 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PTPN6P29350 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 AC141586.5-201ENST00000624546 2050 ntBASIC17.12■□□□□ 0.33
PTPN6P29350 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms