Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN3P26045 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN3P26045 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
PTPN3P26045 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN3P26045 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTPN3P26045 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN3P26045 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN3P26045 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTPN3P26045 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN3P26045 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN3P26045 HYMAI.1-201ENST00000620949 238 ntBASIC18.43■□□□□ 0.54
PTPN3P26045 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PTPN3P26045 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTPN3P26045 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PTPN3P26045 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN3P26045 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PTPN3P26045 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PTPN3P26045 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PTPN3P26045 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.42■□□□□ 0.54
PTPN3P26045 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 HBZP1-201ENST00000354915 429 ntBASIC18.42■□□□□ 0.54
PTPN3P26045 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 FAM8A6P-201ENST00000407496 1135 ntBASIC18.42■□□□□ 0.54
PTPN3P26045 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 AC112907.2-201ENST00000448639 330 ntBASIC18.42■□□□□ 0.54
PTPN3P26045 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.42■□□□□ 0.54
PTPN3P26045 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN3P26045 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN3P26045 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN3P26045 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PTPN3P26045 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PTPN3P26045 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PTPN3P26045 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PTPN3P26045 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN3P26045 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PTPN3P26045 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 GNAS-203ENST00000306120 1878 ntBASIC18.41■□□□□ 0.54
PTPN3P26045 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 AC100803.2-201ENST00000562459 1963 ntBASIC18.41■□□□□ 0.54
PTPN3P26045 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN3P26045 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.41■□□□□ 0.54
PTPN3P26045 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.41■□□□□ 0.54
PTPN3P26045 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN3P26045 KRT18P48-201ENST00000434763 852 ntBASIC18.41■□□□□ 0.54
PTPN3P26045 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.41■□□□□ 0.54
PTPN3P26045 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PTPN3P26045 AC063952.2-201ENST00000498792 1227 ntBASIC18.41■□□□□ 0.54
PTPN3P26045 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.41■□□□□ 0.54
PTPN3P26045 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.41■□□□□ 0.54
PTPN3P26045 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PTPN3P26045 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
PTPN3P26045 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN3P26045 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms