Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC132938.6-201ENST00000623828 1655 ntBASIC15.55■□□□□ 0.08
CD40P25942 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.55■□□□□ 0.08
CD40P25942 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CD40P25942 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.55■□□□□ 0.08
CD40P25942 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.55■□□□□ 0.08
CD40P25942 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.55■□□□□ 0.08
CD40P25942 AC112698.1-201ENST00000510299 916 ntBASIC15.55■□□□□ 0.08
CD40P25942 AC114341.1-201ENST00000618070 349 ntBASIC15.55■□□□□ 0.08
CD40P25942 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.55■□□□□ 0.08
CD40P25942 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.55■□□□□ 0.08
CD40P25942 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CD40P25942 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.55■□□□□ 0.08
CD40P25942 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.54■□□□□ 0.08
CD40P25942 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.54■□□□□ 0.08
CD40P25942 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CD40P25942 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.54■□□□□ 0.08
CD40P25942 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.54■□□□□ 0.08
CD40P25942 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.54■□□□□ 0.08
CD40P25942 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CD40P25942 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.54■□□□□ 0.08
CD40P25942 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CD40P25942 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CD40P25942 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.54■□□□□ 0.08
CD40P25942 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.54■□□□□ 0.08
CD40P25942 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.54■□□□□ 0.08
CD40P25942 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
CD40P25942 AC009533.2-201ENST00000543664 586 ntBASIC15.54■□□□□ 0.08
CD40P25942 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 MIR5100-201ENST00000579544 119 ntBASIC15.54■□□□□ 0.08
CD40P25942 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CD40P25942 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CD40P25942 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.54■□□□□ 0.08
CD40P25942 AL591684.3-201ENST00000605187 298 ntBASIC15.54■□□□□ 0.08
CD40P25942 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CD40P25942 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CD40P25942 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.54■□□□□ 0.08
CD40P25942 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.54■□□□□ 0.08
CD40P25942 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.54■□□□□ 0.08
CD40P25942 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.54■□□□□ 0.08
CD40P25942 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD40P25942 AC093010.1-201ENST00000473625 1624 ntBASIC15.54■□□□□ 0.08
CD40P25942 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.53■□□□□ 0.08
CD40P25942 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.53■□□□□ 0.08
CD40P25942 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.53■□□□□ 0.08
CD40P25942 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CD40P25942 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.53■□□□□ 0.08
CD40P25942 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CD40P25942 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CD40P25942 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CD40P25942 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.53■□□□□ 0.08
CD40P25942 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.53■□□□□ 0.08
CD40P25942 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.53■□□□□ 0.08
CD40P25942 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.53■□□□□ 0.08
CD40P25942 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.53■□□□□ 0.08
CD40P25942 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.53■□□□□ 0.08
CD40P25942 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.53■□□□□ 0.08
CD40P25942 AL138831.2-201ENST00000606564 490 ntBASIC15.53■□□□□ 0.08
CD40P25942 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 AC020763.4-201ENST00000623414 4170 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms