Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.39■□□□□ 0.53
NFKB1P19838 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.39■□□□□ 0.53
NFKB1P19838 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.39■□□□□ 0.53
NFKB1P19838 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.39■□□□□ 0.53
NFKB1P19838 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.39■□□□□ 0.53
NFKB1P19838 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
NFKB1P19838 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
NFKB1P19838 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NFKB1P19838 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.39■□□□□ 0.53
NFKB1P19838 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 AC134043.2-201ENST00000624206 2238 ntBASIC18.39■□□□□ 0.53
NFKB1P19838 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.39■□□□□ 0.53
NFKB1P19838 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.39■□□□□ 0.53
NFKB1P19838 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.39■□□□□ 0.53
NFKB1P19838 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.39■□□□□ 0.53
NFKB1P19838 AC090340.1-201ENST00000620778 4980 ntBASIC18.39■□□□□ 0.53
NFKB1P19838 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NFKB1P19838 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 PCDHB18P-201ENST00000524813 2368 ntBASIC18.38■□□□□ 0.53
NFKB1P19838 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NFKB1P19838 AC112907.2-201ENST00000448639 330 ntBASIC18.38■□□□□ 0.53
NFKB1P19838 AC092647.4-201ENST00000457211 535 ntBASIC18.38■□□□□ 0.53
NFKB1P19838 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.38■□□□□ 0.53
NFKB1P19838 AC113404.2-201ENST00000507884 177 ntBASIC18.38■□□□□ 0.53
NFKB1P19838 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.38■□□□□ 0.53
NFKB1P19838 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NFKB1P19838 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NFKB1P19838 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.38■□□□□ 0.53
NFKB1P19838 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
NFKB1P19838 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.38■□□□□ 0.53
NFKB1P19838 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
NFKB1P19838 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NFKB1P19838 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.37■□□□□ 0.53
NFKB1P19838 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.37■□□□□ 0.53
NFKB1P19838 FAM8A6P-201ENST00000407496 1135 ntBASIC18.37■□□□□ 0.53
NFKB1P19838 TMPOP1-202ENST00000424642 1267 ntBASIC18.37■□□□□ 0.53
NFKB1P19838 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
NFKB1P19838 DUTP2-201ENST00000519164 463 ntBASIC18.37■□□□□ 0.53
NFKB1P19838 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.37■□□□□ 0.53
NFKB1P19838 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NFKB1P19838 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 KRT89P-201ENST00000620027 1478 ntBASIC18.37■□□□□ 0.53
NFKB1P19838 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NFKB1P19838 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
NFKB1P19838 KRT18P55-202ENST00000578578 1546 ntBASIC18.37■□□□□ 0.53
NFKB1P19838 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.37■□□□□ 0.53
NFKB1P19838 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NFKB1P19838 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFKB1P19838 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NFKB1P19838 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NFKB1P19838 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NFKB1P19838 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NFKB1P19838 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NFKB1P19838 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms