Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.87■□□□□ 0.93
ERCC3P19447 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.87■□□□□ 0.93
ERCC3P19447 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 RCN1P2-201ENST00000398357 915 ntBASIC20.87■□□□□ 0.93
ERCC3P19447 KRT18P67-201ENST00000432816 1264 ntBASIC20.87■□□□□ 0.93
ERCC3P19447 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 AC068472.1-201ENST00000474589 881 ntBASIC20.87■□□□□ 0.93
ERCC3P19447 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC3P19447 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC3P19447 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC3P19447 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ERCC3P19447 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC3P19447 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC3P19447 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.86■□□□□ 0.93
ERCC3P19447 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
ERCC3P19447 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC3P19447 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 AL031284.1-201ENST00000419297 478 ntBASIC20.86■□□□□ 0.93
ERCC3P19447 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ERCC3P19447 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.86■□□□□ 0.93
ERCC3P19447 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC3P19447 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.86■□□□□ 0.93
ERCC3P19447 AC008608.2-201ENST00000606089 416 ntBASIC20.86■□□□□ 0.93
ERCC3P19447 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ERCC3P19447 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
ERCC3P19447 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC3P19447 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ERCC3P19447 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ERCC3P19447 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 AL024508.2-201ENST00000607749 1894 ntBASIC20.86■□□□□ 0.93
ERCC3P19447 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC3P19447 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.85■□□□□ 0.93
ERCC3P19447 MYLKP1-201ENST00000509077 1580 ntBASIC20.85■□□□□ 0.93
ERCC3P19447 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.85■□□□□ 0.93
ERCC3P19447 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.85■□□□□ 0.93
ERCC3P19447 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.85■□□□□ 0.93
ERCC3P19447 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ERCC3P19447 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.85■□□□□ 0.93
ERCC3P19447 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.85■□□□□ 0.93
ERCC3P19447 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.85■□□□□ 0.93
ERCC3P19447 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.85■□□□□ 0.93
ERCC3P19447 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.85■□□□□ 0.93
ERCC3P19447 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.85■□□□□ 0.93
ERCC3P19447 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.85■□□□□ 0.93
ERCC3P19447 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.85■□□□□ 0.93
ERCC3P19447 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.85■□□□□ 0.93
ERCC3P19447 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.85■□□□□ 0.93
ERCC3P19447 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.85■□□□□ 0.93
ERCC3P19447 TP73-AS1-210ENST00000637775 1455 ntBASIC20.85■□□□□ 0.93
ERCC3P19447 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.85■□□□□ 0.93
ERCC3P19447 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
ERCC3P19447 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.85■□□□□ 0.93
ERCC3P19447 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.85■□□□□ 0.93
ERCC3P19447 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC3P19447 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC3P19447 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC3P19447 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms