Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC004817.3-201ENST00000602957 2129 ntBASIC20.02■□□□□ 0.8
SMPD1P17405 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.02■□□□□ 0.8
SMPD1P17405 LAGE3P1-201ENST00000425356 484 ntBASIC20.02■□□□□ 0.8
SMPD1P17405 KRT18P3-201ENST00000451602 1288 ntBASIC20.02■□□□□ 0.8
SMPD1P17405 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.02■□□□□ 0.8
SMPD1P17405 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.02■□□□□ 0.8
SMPD1P17405 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.02■□□□□ 0.8
SMPD1P17405 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.02■□□□□ 0.8
SMPD1P17405 AD001527.2-201ENST00000622994 785 ntBASIC20.02■□□□□ 0.8
SMPD1P17405 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.02■□□□□ 0.8
SMPD1P17405 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SMPD1P17405 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SMPD1P17405 PHGDH-209ENST00000641074 1780 ntBASIC20.02■□□□□ 0.8
SMPD1P17405 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SMPD1P17405 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SMPD1P17405 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
SMPD1P17405 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.01■□□□□ 0.79
SMPD1P17405 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMPD1P17405 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SMPD1P17405 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMPD1P17405 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMPD1P17405 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMPD1P17405 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.01■□□□□ 0.79
SMPD1P17405 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.01■□□□□ 0.79
SMPD1P17405 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.01■□□□□ 0.79
SMPD1P17405 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.01■□□□□ 0.79
SMPD1P17405 AC122714.2-201ENST00000502787 707 ntBASIC20.01■□□□□ 0.79
SMPD1P17405 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMPD1P17405 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.01■□□□□ 0.79
SMPD1P17405 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.01■□□□□ 0.79
SMPD1P17405 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SMPD1P17405 AL022326.1-202ENST00000641533 845 ntBASIC20.01■□□□□ 0.79
SMPD1P17405 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.01■□□□□ 0.79
SMPD1P17405 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMPD1P17405 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.01■□□□□ 0.79
SMPD1P17405 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMPD1P17405 AIRN-201ENST00000601203 4374 ntBASIC20■□□□□ 0.79
SMPD1P17405 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20■□□□□ 0.79
SMPD1P17405 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SMPD1P17405 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20■□□□□ 0.79
SMPD1P17405 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
SMPD1P17405 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SMPD1P17405 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
SMPD1P17405 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20■□□□□ 0.79
SMPD1P17405 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20■□□□□ 0.79
SMPD1P17405 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20■□□□□ 0.79
SMPD1P17405 AC073592.4-201ENST00000623827 446 ntBASIC20■□□□□ 0.79
SMPD1P17405 AC093010.1-201ENST00000473625 1624 ntBASIC20■□□□□ 0.79
SMPD1P17405 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SMPD1P17405 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD1P17405 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SMPD1P17405 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.99■□□□□ 0.79
SMPD1P17405 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.99■□□□□ 0.79
SMPD1P17405 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SMPD1P17405 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.99■□□□□ 0.79
SMPD1P17405 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.99■□□□□ 0.79
SMPD1P17405 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.99■□□□□ 0.79
SMPD1P17405 AL139424.1-201ENST00000607572 797 ntBASIC19.99■□□□□ 0.79
SMPD1P17405 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.99■□□□□ 0.79
SMPD1P17405 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD1P17405 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMPD1P17405 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMPD1P17405 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMPD1P17405 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.98■□□□□ 0.79
SMPD1P17405 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMPD1P17405 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.98■□□□□ 0.79
SMPD1P17405 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SMPD1P17405 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms