Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC31.4■■■□□ 2.62
TOP2AP11388 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC31.4■■■□□ 2.62
TOP2AP11388 RFPL4AP1-201ENST00000530883 850 ntBASIC31.4■■■□□ 2.62
TOP2AP11388 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC31.4■■■□□ 2.62
TOP2AP11388 AC079781.4-201ENST00000641908 219 ntBASIC31.4■■■□□ 2.62
TOP2AP11388 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
TOP2AP11388 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TOP2AP11388 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TOP2AP11388 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TOP2AP11388 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC31.4■■■□□ 2.62
TOP2AP11388 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC31.39■■■□□ 2.62
TOP2AP11388 CYB561-217ENST00000582997 877 ntTSL 5 BASIC31.39■■■□□ 2.62
TOP2AP11388 AC027612.4-201ENST00000605371 583 ntBASIC31.39■■■□□ 2.62
TOP2AP11388 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
TOP2AP11388 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
TOP2AP11388 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
TOP2AP11388 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
TOP2AP11388 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
TOP2AP11388 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC31.39■■■□□ 2.62
TOP2AP11388 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
TOP2AP11388 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
TOP2AP11388 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
TOP2AP11388 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
TOP2AP11388 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC31.39■■■□□ 2.61
TOP2AP11388 IGHV3-65-201ENST00000523210 341 ntBASIC31.39■■■□□ 2.61
TOP2AP11388 MIR4751-201ENST00000578027 74 ntBASIC31.39■■■□□ 2.61
TOP2AP11388 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC31.39■■■□□ 2.61
TOP2AP11388 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC31.39■■■□□ 2.61
TOP2AP11388 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC31.39■■■□□ 2.61
TOP2AP11388 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC31.39■■■□□ 2.61
TOP2AP11388 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TOP2AP11388 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TOP2AP11388 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC31.38■■■□□ 2.61
TOP2AP11388 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TOP2AP11388 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC31.38■■■□□ 2.61
TOP2AP11388 FUT8-AS1-201ENST00000621019 1521 ntBASIC31.38■■■□□ 2.61
TOP2AP11388 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC31.38■■■□□ 2.61
TOP2AP11388 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC31.38■■■□□ 2.61
TOP2AP11388 LBH-203ENST00000404397 543 ntTSL 4 BASIC31.38■■■□□ 2.61
TOP2AP11388 AC254562.1-201ENST00000417586 456 ntBASIC31.38■■■□□ 2.61
TOP2AP11388 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC31.38■■■□□ 2.61
TOP2AP11388 DUTP2-201ENST00000519164 463 ntBASIC31.38■■■□□ 2.61
TOP2AP11388 AC010507.1-201ENST00000633895 436 ntBASIC31.38■■■□□ 2.61
TOP2AP11388 AL049757.1-201ENST00000616842 1596 ntBASIC31.38■■■□□ 2.61
TOP2AP11388 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TOP2AP11388 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TOP2AP11388 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TOP2AP11388 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TOP2AP11388 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC31.37■■■□□ 2.61
TOP2AP11388 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC31.37■■■□□ 2.61
TOP2AP11388 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC31.37■■■□□ 2.61
TOP2AP11388 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC31.37■■■□□ 2.61
TOP2AP11388 RPS15P9-201ENST00000494093 319 ntBASIC31.37■■■□□ 2.61
TOP2AP11388 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC31.37■■■□□ 2.61
TOP2AP11388 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC31.37■■■□□ 2.61
TOP2AP11388 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
TOP2AP11388 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC31.37■■■□□ 2.61
TOP2AP11388 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC31.37■■■□□ 2.61
TOP2AP11388 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TOP2AP11388 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TOP2AP11388 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC31.36■■■□□ 2.61
TOP2AP11388 SIRPAP1-201ENST00000448467 1770 ntBASIC31.36■■■□□ 2.61
TOP2AP11388 COX5BP2-201ENST00000392354 334 ntBASIC31.36■■■□□ 2.61
TOP2AP11388 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
TOP2AP11388 CYMP-203ENST00000474680 1263 ntBASIC31.36■■■□□ 2.61
TOP2AP11388 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC31.36■■■□□ 2.61
TOP2AP11388 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC31.36■■■□□ 2.61
TOP2AP11388 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
TOP2AP11388 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TOP2AP11388 GID4-202ENST00000376345 1391 ntTSL 3 BASIC31.36■■■□□ 2.61
TOP2AP11388 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC31.36■■■□□ 2.61
TOP2AP11388 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TOP2AP11388 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TOP2AP11388 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
TOP2AP11388 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC31.35■■■□□ 2.61
TOP2AP11388 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TOP2AP11388 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC31.35■■■□□ 2.61
TOP2AP11388 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TOP2AP11388 SLC4A1APP2-201ENST00000424054 1259 ntBASIC31.35■■■□□ 2.61
TOP2AP11388 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC31.35■■■□□ 2.61
TOP2AP11388 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TOP2AP11388 AC126763.1-201ENST00000552015 2118 ntBASIC31.35■■■□□ 2.61
TOP2AP11388 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC31.35■■■□□ 2.61
TOP2AP11388 AC010654.1-201ENST00000615722 808 ntBASIC31.35■■■□□ 2.61
TOP2AP11388 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC31.35■■■□□ 2.61
TOP2AP11388 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC31.35■■■□□ 2.61
TOP2AP11388 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TOP2AP11388 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TOP2AP11388 AC003669.1-201ENST00000334569 611 ntBASIC31.34■■■□□ 2.61
TOP2AP11388 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
TOP2AP11388 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC31.34■■■□□ 2.61
TOP2AP11388 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC31.34■■■□□ 2.61
TOP2AP11388 HTR5BP-201ENST00000430851 1154 ntBASIC31.34■■■□□ 2.61
TOP2AP11388 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TOP2AP11388 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC31.34■■■□□ 2.61
TOP2AP11388 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC31.34■■■□□ 2.61
TOP2AP11388 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC31.34■■■□□ 2.61
TOP2AP11388 MIR4469-201ENST00000583919 79 ntBASIC31.34■■■□□ 2.61
TOP2AP11388 AL078644.1-201ENST00000609881 752 ntBASIC31.34■■■□□ 2.61
TOP2AP11388 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms