Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.13□□□□□ -0.15
CD28P10747 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.13□□□□□ -0.15
CD28P10747 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 AL024508.2-201ENST00000607749 1894 ntBASIC14.12□□□□□ -0.15
CD28P10747 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CD28P10747 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.12□□□□□ -0.15
CD28P10747 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CD28P10747 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CD28P10747 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.12□□□□□ -0.15
CD28P10747 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.12□□□□□ -0.15
CD28P10747 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.12□□□□□ -0.15
CD28P10747 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.12□□□□□ -0.15
CD28P10747 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.12□□□□□ -0.15
CD28P10747 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 AF238378.1-201ENST00000526806 358 ntBASIC14.12□□□□□ -0.15
CD28P10747 AL662844.1-201ENST00000546340 181 ntBASIC14.12□□□□□ -0.15
CD28P10747 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.12□□□□□ -0.15
CD28P10747 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.12□□□□□ -0.15
CD28P10747 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.12□□□□□ -0.15
CD28P10747 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.12□□□□□ -0.15
CD28P10747 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.12□□□□□ -0.15
CD28P10747 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.12□□□□□ -0.15
CD28P10747 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CD28P10747 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CD28P10747 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.12□□□□□ -0.15
CD28P10747 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.12□□□□□ -0.15
CD28P10747 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD28P10747 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.12□□□□□ -0.15
CD28P10747 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 AP000974.1-201ENST00000623909 2387 ntBASIC14.11□□□□□ -0.15
CD28P10747 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
CD28P10747 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CD28P10747 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CD28P10747 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CD28P10747 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CD28P10747 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CD28P10747 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 AL022342.1-201ENST00000400363 863 ntBASIC14.11□□□□□ -0.15
CD28P10747 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CD28P10747 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CD28P10747 MIR5100-201ENST00000579544 119 ntBASIC14.11□□□□□ -0.15
CD28P10747 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CD28P10747 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.11□□□□□ -0.15
CD28P10747 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD28P10747 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CD28P10747 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms