Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP3P08254 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP3P08254 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP3P08254 AC073592.3-201ENST00000625118 1834 ntBASIC19.91■□□□□ 0.78
MMP3P08254 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP3P08254 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MMP3P08254 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP3P08254 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP3P08254 BX005266.1-201ENST00000473402 457 ntBASIC19.91■□□□□ 0.78
MMP3P08254 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.91■□□□□ 0.78
MMP3P08254 AC034105.1-201ENST00000563488 319 ntBASIC19.91■□□□□ 0.78
MMP3P08254 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP3P08254 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP3P08254 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP3P08254 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MMP3P08254 PMPCAP1-201ENST00000508114 1576 ntBASIC19.91■□□□□ 0.78
MMP3P08254 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP3P08254 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MMP3P08254 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MMP3P08254 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.9■□□□□ 0.78
MMP3P08254 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MMP3P08254 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MMP3P08254 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP3P08254 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.9■□□□□ 0.78
MMP3P08254 BX842568.4-201ENST00000421222 227 ntBASIC19.9■□□□□ 0.78
MMP3P08254 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP3P08254 AC122714.2-201ENST00000502787 707 ntBASIC19.9■□□□□ 0.78
MMP3P08254 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP3P08254 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.9■□□□□ 0.78
MMP3P08254 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MMP3P08254 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.9■□□□□ 0.78
MMP3P08254 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MMP3P08254 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP3P08254 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP3P08254 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
MMP3P08254 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP3P08254 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
MMP3P08254 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP3P08254 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.89■□□□□ 0.77
MMP3P08254 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.89■□□□□ 0.77
MMP3P08254 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.89■□□□□ 0.77
MMP3P08254 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP3P08254 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.89■□□□□ 0.77
MMP3P08254 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
MMP3P08254 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
MMP3P08254 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.89■□□□□ 0.77
MMP3P08254 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP3P08254 RNA5SP415-201ENST00000517246 115 ntBASIC19.89■□□□□ 0.77
MMP3P08254 PGAM5P1-201ENST00000518923 814 ntBASIC19.89■□□□□ 0.77
MMP3P08254 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.89■□□□□ 0.77
MMP3P08254 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.89■□□□□ 0.77
MMP3P08254 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.89■□□□□ 0.77
MMP3P08254 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP3P08254 AC105339.3-201ENST00000560043 636 ntBASIC19.89■□□□□ 0.77
MMP3P08254 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.89■□□□□ 0.77
MMP3P08254 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.89■□□□□ 0.77
MMP3P08254 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.89■□□□□ 0.77
MMP3P08254 AP002414.3-201ENST00000589352 1468 ntBASIC19.89■□□□□ 0.77
MMP3P08254 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP3P08254 AC140113.2-201ENST00000604370 208 ntBASIC19.89■□□□□ 0.77
MMP3P08254 Z83851.2-201ENST00000609564 659 ntBASIC19.89■□□□□ 0.77
MMP3P08254 AC027601.4-201ENST00000611259 610 ntBASIC19.89■□□□□ 0.77
MMP3P08254 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP3P08254 AD001527.2-201ENST00000622994 785 ntBASIC19.89■□□□□ 0.77
MMP3P08254 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.89■□□□□ 0.77
MMP3P08254 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP3P08254 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP3P08254 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.88■□□□□ 0.77
MMP3P08254 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.88■□□□□ 0.77
MMP3P08254 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.88■□□□□ 0.77
MMP3P08254 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP3P08254 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
MMP3P08254 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MMP3P08254 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP3P08254 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP3P08254 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.88■□□□□ 0.77
MMP3P08254 LAGE3P1-201ENST00000425356 484 ntBASIC19.88■□□□□ 0.77
MMP3P08254 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.88■□□□□ 0.77
MMP3P08254 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.88■□□□□ 0.77
MMP3P08254 DUTP2-201ENST00000519164 463 ntBASIC19.88■□□□□ 0.77
MMP3P08254 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
MMP3P08254 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.88■□□□□ 0.77
MMP3P08254 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.88■□□□□ 0.77
MMP3P08254 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.88■□□□□ 0.77
MMP3P08254 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.88■□□□□ 0.77
MMP3P08254 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.88■□□□□ 0.77
MMP3P08254 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.88■□□□□ 0.77
MMP3P08254 AC073592.4-201ENST00000623827 446 ntBASIC19.88■□□□□ 0.77
MMP3P08254 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms