Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL136038.3-201ENST00000561909 1096 ntBASIC18.33■□□□□ 0.52
HLA-DQB2P05538 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.33■□□□□ 0.52
HLA-DQB2P05538 AL121956.5-201ENST00000625261 221 ntBASIC18.33■□□□□ 0.52
HLA-DQB2P05538 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 KRT18P65-201ENST00000439811 1286 ntBASIC18.32■□□□□ 0.52
HLA-DQB2P05538 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 AC087388.1-201ENST00000571370 1112 ntBASIC18.32■□□□□ 0.52
HLA-DQB2P05538 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-DQB2P05538 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 AC005332.1-201ENST00000577698 1310 ntBASIC18.31■□□□□ 0.52
HLA-DQB2P05538 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 TSPY12P-201ENST00000421279 868 ntBASIC18.31■□□□□ 0.52
HLA-DQB2P05538 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 KRT18P35-201ENST00000510488 1269 ntBASIC18.31■□□□□ 0.52
HLA-DQB2P05538 FAM86EP-206ENST00000510506 987 ntBASIC18.31■□□□□ 0.52
HLA-DQB2P05538 KRT18P55-202ENST00000578578 1546 ntBASIC18.31■□□□□ 0.52
HLA-DQB2P05538 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB2P05538 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.3■□□□□ 0.52
HLA-DQB2P05538 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 AC067852.2-201ENST00000590513 2313 ntBASIC18.3■□□□□ 0.52
HLA-DQB2P05538 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms