Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 PCDHA1-201ENST00000378133 2726 ntBASIC13.62□□□□□ -0.23
HLA-DQA1P01909 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 CROCCP2-202ENST00000412962 2773 ntBASIC13.61□□□□□ -0.23
HLA-DQA1P01909 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 KRT18P55-202ENST00000578578 1546 ntBASIC13.61□□□□□ -0.23
HLA-DQA1P01909 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 AC068338.2-201ENST00000563278 1430 ntBASIC13.61□□□□□ -0.23
HLA-DQA1P01909 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA1P01909 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 AP006587.1-201ENST00000534129 1502 ntBASIC13.6□□□□□ -0.23
HLA-DQA1P01909 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 TSPY23P-201ENST00000440136 739 ntBASIC13.6□□□□□ -0.23
HLA-DQA1P01909 AC006970.2-201ENST00000450065 779 ntBASIC13.6□□□□□ -0.23
HLA-DQA1P01909 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 RARRES2P4-201ENST00000514074 484 ntBASIC13.6□□□□□ -0.23
HLA-DQA1P01909 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA1P01909 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA1P01909 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA1P01909 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms