Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALDH1A1P00352 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALDH1A1P00352 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALDH1A1P00352 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 AL513210.1-201ENST00000629608 234 ntBASIC20.5■□□□□ 0.87
ALDH1A1P00352 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALDH1A1P00352 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALDH1A1P00352 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALDH1A1P00352 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALDH1A1P00352 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALDH1A1P00352 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.49■□□□□ 0.87
ALDH1A1P00352 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALDH1A1P00352 MRPL20P1-201ENST00000400819 433 ntBASIC20.49■□□□□ 0.87
ALDH1A1P00352 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 AC074386.1-202ENST00000463561 864 ntBASIC20.49■□□□□ 0.87
ALDH1A1P00352 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALDH1A1P00352 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ALDH1A1P00352 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 KRT19P2-202ENST00000557173 1012 ntBASIC20.49■□□□□ 0.87
ALDH1A1P00352 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALDH1A1P00352 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALDH1A1P00352 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALDH1A1P00352 BCAR1-209ENST00000546196 1340 ntBASIC20.49■□□□□ 0.87
ALDH1A1P00352 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALDH1A1P00352 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.49■□□□□ 0.87
ALDH1A1P00352 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALDH1A1P00352 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALDH1A1P00352 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALDH1A1P00352 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ALDH1A1P00352 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALDH1A1P00352 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALDH1A1P00352 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALDH1A1P00352 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALDH1A1P00352 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 IGLL3P-201ENST00000412472 434 ntBASIC20.48■□□□□ 0.87
ALDH1A1P00352 DDX43P3-201ENST00000441064 443 ntBASIC20.48■□□□□ 0.87
ALDH1A1P00352 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALDH1A1P00352 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ALDH1A1P00352 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ALDH1A1P00352 AC063926.2-201ENST00000623766 1308 ntBASIC20.48■□□□□ 0.87
ALDH1A1P00352 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ALDH1A1P00352 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALDH1A1P00352 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ALDH1A1P00352 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALDH1A1P00352 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALDH1A1P00352 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALDH1A1P00352 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.47■□□□□ 0.87
ALDH1A1P00352 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.47■□□□□ 0.87
ALDH1A1P00352 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.47■□□□□ 0.87
ALDH1A1P00352 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.47■□□□□ 0.87
ALDH1A1P00352 RNA5SP421-201ENST00000516864 134 ntBASIC20.47■□□□□ 0.87
ALDH1A1P00352 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.47■□□□□ 0.87
ALDH1A1P00352 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
ALDH1A1P00352 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.47■□□□□ 0.87
ALDH1A1P00352 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALDH1A1P00352 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALDH1A1P00352 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALDH1A1P00352 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms