Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 AL031985.4-201ENST00000642138 673 ntBASIC20.73■□□□□ 0.91
MBD3O95983 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.73■□□□□ 0.91
MBD3O95983 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MBD3O95983 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.73■□□□□ 0.91
MBD3O95983 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.73■□□□□ 0.91
MBD3O95983 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.73■□□□□ 0.91
MBD3O95983 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.73■□□□□ 0.91
MBD3O95983 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD3O95983 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.72■□□□□ 0.91
MBD3O95983 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.72■□□□□ 0.91
MBD3O95983 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
MBD3O95983 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.72■□□□□ 0.91
MBD3O95983 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.72■□□□□ 0.91
MBD3O95983 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
MBD3O95983 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.72■□□□□ 0.91
MBD3O95983 AP003097.1-201ENST00000530657 1135 ntBASIC20.72■□□□□ 0.91
MBD3O95983 MIR3180-5-201ENST00000583743 153 ntBASIC20.72■□□□□ 0.91
MBD3O95983 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.72■□□□□ 0.91
MBD3O95983 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MBD3O95983 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD3O95983 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD3O95983 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
MBD3O95983 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD3O95983 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
MBD3O95983 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3O95983 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.71■□□□□ 0.91
MBD3O95983 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.71■□□□□ 0.91
MBD3O95983 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
MBD3O95983 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.71■□□□□ 0.91
MBD3O95983 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
MBD3O95983 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
MBD3O95983 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
MBD3O95983 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.71■□□□□ 0.91
MBD3O95983 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
MBD3O95983 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.71■□□□□ 0.91
MBD3O95983 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3O95983 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.71■□□□□ 0.91
MBD3O95983 LINC00304-203ENST00000565008 1864 ntBASIC20.71■□□□□ 0.91
MBD3O95983 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.71■□□□□ 0.91
MBD3O95983 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
MBD3O95983 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.7■□□□□ 0.9
MBD3O95983 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
MBD3O95983 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MBD3O95983 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MBD3O95983 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.7■□□□□ 0.9
MBD3O95983 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.7■□□□□ 0.9
MBD3O95983 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.7■□□□□ 0.9
MBD3O95983 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
MBD3O95983 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
MBD3O95983 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MBD3O95983 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
MBD3O95983 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms