Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH16O75309 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.28■□□□□ 0.52
CDH16O75309 MIR6786-201ENST00000616843 113 ntBASIC18.28■□□□□ 0.52
CDH16O75309 PKD1P1-201ENST00000458669 6805 ntBASIC18.28■□□□□ 0.52
CDH16O75309 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.28■□□□□ 0.52
CDH16O75309 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CDH16O75309 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH16O75309 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH16O75309 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH16O75309 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CDH16O75309 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.27■□□□□ 0.52
CDH16O75309 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH16O75309 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH16O75309 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH16O75309 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH16O75309 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH16O75309 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH16O75309 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH16O75309 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH16O75309 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH16O75309 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.27■□□□□ 0.52
CDH16O75309 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.27■□□□□ 0.52
CDH16O75309 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH16O75309 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.27■□□□□ 0.52
CDH16O75309 AP000692.2-201ENST00000608391 879 ntBASIC18.27■□□□□ 0.52
CDH16O75309 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH16O75309 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH16O75309 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH16O75309 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH16O75309 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH16O75309 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CDH16O75309 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH16O75309 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH16O75309 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH16O75309 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH16O75309 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 CROCCP2-202ENST00000412962 2773 ntBASIC18.26■□□□□ 0.51
CDH16O75309 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH16O75309 HOXB1-202ENST00000577092 1414 ntBASIC18.26■□□□□ 0.51
CDH16O75309 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CDH16O75309 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 AC128676.1-201ENST00000454392 318 ntBASIC18.26■□□□□ 0.51
CDH16O75309 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH16O75309 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH16O75309 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.26■□□□□ 0.51
CDH16O75309 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH16O75309 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH16O75309 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH16O75309 AC096733.2-201ENST00000609937 1394 ntBASIC18.26■□□□□ 0.51
CDH16O75309 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH16O75309 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH16O75309 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH16O75309 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH16O75309 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH16O75309 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH16O75309 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH16O75309 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDH16O75309 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH16O75309 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH16O75309 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH16O75309 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH16O75309 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDH16O75309 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.25■□□□□ 0.51
CDH16O75309 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDH16O75309 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH16O75309 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH16O75309 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH16O75309 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
CDH16O75309 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms