Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HCN1O60741 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
HCN1O60741 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HCN1O60741 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HCN1O60741 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.91■□□□□ 0.3
HCN1O60741 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HCN1O60741 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HCN1O60741 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 KRT8P7-201ENST00000533003 1432 ntBASIC16.91■□□□□ 0.3
HCN1O60741 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.91■□□□□ 0.3
HCN1O60741 UPK3BP1-201ENST00000428678 509 ntBASIC16.91■□□□□ 0.3
HCN1O60741 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.91■□□□□ 0.3
HCN1O60741 AL136038.3-201ENST00000561909 1096 ntBASIC16.91■□□□□ 0.3
HCN1O60741 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.91■□□□□ 0.3
HCN1O60741 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.91■□□□□ 0.3
HCN1O60741 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 AL357033.4-201ENST00000617703 1807 ntBASIC16.91■□□□□ 0.3
HCN1O60741 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
HCN1O60741 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
HCN1O60741 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCN1O60741 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 IER3-202ENST00000376377 1350 ntBASIC16.9■□□□□ 0.3
HCN1O60741 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HCN1O60741 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.9■□□□□ 0.3
HCN1O60741 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HCN1O60741 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.9■□□□□ 0.3
HCN1O60741 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.9■□□□□ 0.3
HCN1O60741 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.9■□□□□ 0.3
HCN1O60741 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.9■□□□□ 0.3
HCN1O60741 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.9■□□□□ 0.3
HCN1O60741 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.9■□□□□ 0.3
HCN1O60741 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.9■□□□□ 0.3
HCN1O60741 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.9■□□□□ 0.3
HCN1O60741 ZNF444P1-201ENST00000559497 298 ntBASIC16.9■□□□□ 0.3
HCN1O60741 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.9■□□□□ 0.3
HCN1O60741 AC112497.1-201ENST00000624824 639 ntBASIC16.9■□□□□ 0.3
HCN1O60741 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.9■□□□□ 0.3
HCN1O60741 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.9■□□□□ 0.3
HCN1O60741 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HCN1O60741 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.9■□□□□ 0.3
HCN1O60741 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.9■□□□□ 0.3
HCN1O60741 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.9■□□□□ 0.3
HCN1O60741 RCC2P3-201ENST00000418112 1537 ntBASIC16.9■□□□□ 0.3
HCN1O60741 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCN1O60741 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.9■□□□□ 0.3
HCN1O60741 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.9■□□□□ 0.3
HCN1O60741 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HCN1O60741 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.89■□□□□ 0.3
HCN1O60741 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
HCN1O60741 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
HCN1O60741 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.89■□□□□ 0.29
HCN1O60741 LINC01311-201ENST00000565162 1445 ntBASIC16.89■□□□□ 0.29
HCN1O60741 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.89■□□□□ 0.29
HCN1O60741 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.89■□□□□ 0.29
HCN1O60741 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 SPDYE15P-201ENST00000424157 909 ntBASIC16.89■□□□□ 0.29
HCN1O60741 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.89■□□□□ 0.29
HCN1O60741 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.89■□□□□ 0.29
HCN1O60741 RASA4DP-201ENST00000460726 1199 ntBASIC16.89■□□□□ 0.29
HCN1O60741 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.89■□□□□ 0.29
HCN1O60741 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HCN1O60741 AC024243.1-201ENST00000609234 778 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms