Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.28■□□□□ 0.36
LCMT2O60294 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.28■□□□□ 0.36
LCMT2O60294 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.28■□□□□ 0.36
LCMT2O60294 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.28■□□□□ 0.36
LCMT2O60294 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.28■□□□□ 0.36
LCMT2O60294 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.28■□□□□ 0.36
LCMT2O60294 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.28■□□□□ 0.36
LCMT2O60294 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
LCMT2O60294 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LCMT2O60294 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 AC016734.2-201ENST00000624325 1377 ntBASIC17.28■□□□□ 0.36
LCMT2O60294 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.27■□□□□ 0.36
LCMT2O60294 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.27■□□□□ 0.36
LCMT2O60294 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.27■□□□□ 0.36
LCMT2O60294 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.27■□□□□ 0.36
LCMT2O60294 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
LCMT2O60294 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LCMT2O60294 TSPY12P-201ENST00000421279 868 ntBASIC17.27■□□□□ 0.36
LCMT2O60294 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.27■□□□□ 0.36
LCMT2O60294 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LCMT2O60294 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LCMT2O60294 DUTP2-201ENST00000519164 463 ntBASIC17.27■□□□□ 0.36
LCMT2O60294 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.27■□□□□ 0.36
LCMT2O60294 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LCMT2O60294 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LCMT2O60294 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.27■□□□□ 0.36
LCMT2O60294 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LCMT2O60294 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
LCMT2O60294 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.27■□□□□ 0.35
LCMT2O60294 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LCMT2O60294 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LCMT2O60294 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.27■□□□□ 0.35
LCMT2O60294 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LCMT2O60294 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LCMT2O60294 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LCMT2O60294 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LCMT2O60294 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LCMT2O60294 FLJ13224-201ENST00000313737 1514 ntBASIC17.26■□□□□ 0.35
LCMT2O60294 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.26■□□□□ 0.35
LCMT2O60294 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.26■□□□□ 0.35
LCMT2O60294 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.26■□□□□ 0.35
LCMT2O60294 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LCMT2O60294 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.26■□□□□ 0.35
LCMT2O60294 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.26■□□□□ 0.35
LCMT2O60294 KRT8P26-201ENST00000534154 1276 ntBASIC17.26■□□□□ 0.35
LCMT2O60294 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.26■□□□□ 0.35
LCMT2O60294 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.26■□□□□ 0.35
LCMT2O60294 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LCMT2O60294 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LCMT2O60294 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LCMT2O60294 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.26■□□□□ 0.35
LCMT2O60294 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.26■□□□□ 0.35
LCMT2O60294 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.26■□□□□ 0.35
LCMT2O60294 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LCMT2O60294 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LCMT2O60294 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LCMT2O60294 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCMT2O60294 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LCMT2O60294 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms