Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 AC020763.4-201ENST00000623414 4170 ntBASIC17.69■□□□□ 0.42
VEGFDO43915 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.69■□□□□ 0.42
VEGFDO43915 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.69■□□□□ 0.42
VEGFDO43915 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VEGFDO43915 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.69■□□□□ 0.42
VEGFDO43915 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
VEGFDO43915 FLJ13224-201ENST00000313737 1514 ntBASIC17.69■□□□□ 0.42
VEGFDO43915 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VEGFDO43915 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.69■□□□□ 0.42
VEGFDO43915 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VEGFDO43915 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
VEGFDO43915 IGHV3-47-201ENST00000425060 335 ntBASIC17.69■□□□□ 0.42
VEGFDO43915 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.69■□□□□ 0.42
VEGFDO43915 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.69■□□□□ 0.42
VEGFDO43915 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.69■□□□□ 0.42
VEGFDO43915 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.69■□□□□ 0.42
VEGFDO43915 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 AC074051.2-201ENST00000565115 352 ntBASIC17.69■□□□□ 0.42
VEGFDO43915 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.69■□□□□ 0.42
VEGFDO43915 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
VEGFDO43915 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
VEGFDO43915 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
VEGFDO43915 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.69■□□□□ 0.42
VEGFDO43915 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
VEGFDO43915 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VEGFDO43915 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VEGFDO43915 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VEGFDO43915 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
VEGFDO43915 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
VEGFDO43915 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VEGFDO43915 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
VEGFDO43915 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VEGFDO43915 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.68■□□□□ 0.42
VEGFDO43915 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.68■□□□□ 0.42
VEGFDO43915 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.68■□□□□ 0.42
VEGFDO43915 AP005901.3-202ENST00000581653 237 ntBASIC17.68■□□□□ 0.42
VEGFDO43915 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.68■□□□□ 0.42
VEGFDO43915 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VEGFDO43915 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VEGFDO43915 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.68■□□□□ 0.42
VEGFDO43915 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
VEGFDO43915 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VEGFDO43915 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VEGFDO43915 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VEGFDO43915 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
VEGFDO43915 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VEGFDO43915 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VEGFDO43915 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VEGFDO43915 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.67■□□□□ 0.42
VEGFDO43915 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.67■□□□□ 0.42
VEGFDO43915 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.67■□□□□ 0.42
VEGFDO43915 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.67■□□□□ 0.42
VEGFDO43915 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.67■□□□□ 0.42
VEGFDO43915 MINOS1P3-201ENST00000457048 203 ntBASIC17.67■□□□□ 0.42
VEGFDO43915 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.67■□□□□ 0.42
VEGFDO43915 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 AC091607.1-201ENST00000490318 1060 ntBASIC17.67■□□□□ 0.42
VEGFDO43915 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.67■□□□□ 0.42
VEGFDO43915 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.67■□□□□ 0.42
VEGFDO43915 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.67■□□□□ 0.42
VEGFDO43915 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.67■□□□□ 0.42
VEGFDO43915 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.67■□□□□ 0.42
VEGFDO43915 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.67■□□□□ 0.42
VEGFDO43915 CLEC4GP1-201ENST00000596555 870 ntBASIC17.67■□□□□ 0.42
VEGFDO43915 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.67■□□□□ 0.42
VEGFDO43915 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.67■□□□□ 0.42
VEGFDO43915 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.67■□□□□ 0.42
VEGFDO43915 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.67■□□□□ 0.42
VEGFDO43915 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
VEGFDO43915 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.67■□□□□ 0.42
VEGFDO43915 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.67■□□□□ 0.42
VEGFDO43915 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms