Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AL136038.4-201ENST00000603606 1261 ntBASIC16.42■□□□□ 0.22
SMAD9O15198 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.42■□□□□ 0.22
SMAD9O15198 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.42■□□□□ 0.22
SMAD9O15198 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SMAD9O15198 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SMAD9O15198 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SMAD9O15198 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.41■□□□□ 0.22
SMAD9O15198 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SMAD9O15198 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.41■□□□□ 0.22
SMAD9O15198 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.41■□□□□ 0.22
SMAD9O15198 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.41■□□□□ 0.22
SMAD9O15198 HBZP1-201ENST00000354915 429 ntBASIC16.41■□□□□ 0.22
SMAD9O15198 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.41■□□□□ 0.22
SMAD9O15198 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.41■□□□□ 0.22
SMAD9O15198 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.41■□□□□ 0.22
SMAD9O15198 AL445228.2-201ENST00000605589 952 ntBASIC16.41■□□□□ 0.22
SMAD9O15198 AC083849.1-201ENST00000615227 514 ntBASIC16.41■□□□□ 0.22
SMAD9O15198 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.41■□□□□ 0.22
SMAD9O15198 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SMAD9O15198 LINC01311-201ENST00000565162 1445 ntBASIC16.41■□□□□ 0.22
SMAD9O15198 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.41■□□□□ 0.22
SMAD9O15198 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.41■□□□□ 0.22
SMAD9O15198 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMAD9O15198 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SMAD9O15198 AL391807.1-203ENST00000604392 2365 ntBASIC16.41■□□□□ 0.22
SMAD9O15198 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SMAD9O15198 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
SMAD9O15198 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SMAD9O15198 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
SMAD9O15198 FER1L4-210ENST00000615531 5998 ntBASIC16.4■□□□□ 0.22
SMAD9O15198 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SMAD9O15198 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.4■□□□□ 0.22
SMAD9O15198 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.4■□□□□ 0.22
SMAD9O15198 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.4■□□□□ 0.22
SMAD9O15198 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.4■□□□□ 0.22
SMAD9O15198 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SMAD9O15198 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SMAD9O15198 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
SMAD9O15198 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SMAD9O15198 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.4■□□□□ 0.22
SMAD9O15198 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SMAD9O15198 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.4■□□□□ 0.22
SMAD9O15198 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SMAD9O15198 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.4■□□□□ 0.22
SMAD9O15198 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SMAD9O15198 CROCCP1-201ENST00000426910 5675 ntBASIC16.4■□□□□ 0.22
SMAD9O15198 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD9O15198 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms