Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.68■■□□□ 1.06
SEMA3EO15041 AL096828.2-201ENST00000567259 1965 ntBASIC21.68■■□□□ 1.06
SEMA3EO15041 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
SEMA3EO15041 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.68■■□□□ 1.06
SEMA3EO15041 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.68■■□□□ 1.06
SEMA3EO15041 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SEMA3EO15041 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SEMA3EO15041 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SEMA3EO15041 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SEMA3EO15041 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SEMA3EO15041 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SEMA3EO15041 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.67■■□□□ 1.06
SEMA3EO15041 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.67■■□□□ 1.06
SEMA3EO15041 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.67■■□□□ 1.06
SEMA3EO15041 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SEMA3EO15041 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SEMA3EO15041 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.67■■□□□ 1.06
SEMA3EO15041 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.67■■□□□ 1.06
SEMA3EO15041 AC018712.1-201ENST00000455767 687 ntBASIC21.67■■□□□ 1.06
SEMA3EO15041 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.67■■□□□ 1.06
SEMA3EO15041 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SEMA3EO15041 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
SEMA3EO15041 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SEMA3EO15041 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEMA3EO15041 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEMA3EO15041 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.66■■□□□ 1.06
SEMA3EO15041 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SEMA3EO15041 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.66■■□□□ 1.06
SEMA3EO15041 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.66■■□□□ 1.06
SEMA3EO15041 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.66■■□□□ 1.06
SEMA3EO15041 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SEMA3EO15041 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEMA3EO15041 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEMA3EO15041 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.66■■□□□ 1.06
SEMA3EO15041 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.66■■□□□ 1.06
SEMA3EO15041 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.66■■□□□ 1.06
SEMA3EO15041 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.66■■□□□ 1.06
SEMA3EO15041 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.66■■□□□ 1.06
SEMA3EO15041 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.66■■□□□ 1.06
SEMA3EO15041 AP001005.1-201ENST00000571755 1248 ntBASIC21.66■■□□□ 1.06
SEMA3EO15041 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SEMA3EO15041 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SEMA3EO15041 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEMA3EO15041 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEMA3EO15041 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEMA3EO15041 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.66■■□□□ 1.06
SEMA3EO15041 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.66■■□□□ 1.06
SEMA3EO15041 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.65■■□□□ 1.06
SEMA3EO15041 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SEMA3EO15041 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.65■■□□□ 1.06
SEMA3EO15041 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.65■■□□□ 1.06
SEMA3EO15041 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.65■■□□□ 1.06
SEMA3EO15041 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
SEMA3EO15041 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
SEMA3EO15041 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.65■■□□□ 1.06
SEMA3EO15041 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
SEMA3EO15041 AP000867.4-201ENST00000641616 219 ntBASIC21.65■■□□□ 1.06
SEMA3EO15041 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.65■■□□□ 1.06
SEMA3EO15041 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.65■■□□□ 1.06
SEMA3EO15041 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.65■■□□□ 1.06
SEMA3EO15041 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SEMA3EO15041 AC010460.3-201ENST00000511359 1579 ntBASIC21.65■■□□□ 1.06
SEMA3EO15041 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.65■■□□□ 1.06
SEMA3EO15041 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SEMA3EO15041 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.64■■□□□ 1.06
SEMA3EO15041 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SEMA3EO15041 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.64■■□□□ 1.06
SEMA3EO15041 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SEMA3EO15041 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 AL031284.1-201ENST00000419297 478 ntBASIC21.64■■□□□ 1.05
SEMA3EO15041 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.64■■□□□ 1.05
SEMA3EO15041 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.64■■□□□ 1.05
SEMA3EO15041 AC073648.2-201ENST00000510116 352 ntBASIC21.64■■□□□ 1.05
SEMA3EO15041 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.64■■□□□ 1.05
SEMA3EO15041 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms