Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.18■□□□□ 0.34
CASQ2O14958 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.18■□□□□ 0.34
CASQ2O14958 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CASQ2O14958 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.18■□□□□ 0.34
CASQ2O14958 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CASQ2O14958 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.17■□□□□ 0.34
CASQ2O14958 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CASQ2O14958 AC106886.4-201ENST00000623557 2502 ntBASIC17.17■□□□□ 0.34
CASQ2O14958 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CASQ2O14958 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.17■□□□□ 0.34
CASQ2O14958 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CASQ2O14958 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CASQ2O14958 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
CASQ2O14958 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CASQ2O14958 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.17■□□□□ 0.34
CASQ2O14958 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 KRT8P3-201ENST00000519669 1449 ntBASIC17.17■□□□□ 0.34
CASQ2O14958 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CASQ2O14958 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CASQ2O14958 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.17■□□□□ 0.34
CASQ2O14958 RAP2CP1-201ENST00000605103 478 ntBASIC17.17■□□□□ 0.34
CASQ2O14958 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 AC008694.1-202ENST00000636953 945 ntBASIC17.17■□□□□ 0.34
CASQ2O14958 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.17■□□□□ 0.34
CASQ2O14958 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.17■□□□□ 0.34
CASQ2O14958 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.17■□□□□ 0.34
CASQ2O14958 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 HTR7P1-201ENST00000538670 1336 ntBASIC17.17■□□□□ 0.34
CASQ2O14958 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASQ2O14958 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.16■□□□□ 0.34
CASQ2O14958 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.16■□□□□ 0.34
CASQ2O14958 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CASQ2O14958 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.16■□□□□ 0.34
CASQ2O14958 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.16■□□□□ 0.34
CASQ2O14958 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 KRT18P11-201ENST00000435214 1283 ntBASIC17.16■□□□□ 0.34
CASQ2O14958 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CASQ2O14958 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.16■□□□□ 0.34
CASQ2O14958 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.16■□□□□ 0.34
CASQ2O14958 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.16■□□□□ 0.34
CASQ2O14958 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.16■□□□□ 0.34
CASQ2O14958 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.16■□□□□ 0.34
CASQ2O14958 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CASQ2O14958 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASQ2O14958 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.15■□□□□ 0.34
CASQ2O14958 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASQ2O14958 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CASQ2O14958 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CASQ2O14958 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASQ2O14958 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.15■□□□□ 0.34
CASQ2O14958 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms