Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.08■□□□□ 0.65
CAPN9O14815 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN9O14815 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN9O14815 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN9O14815 MIR662-201ENST00000384847 95 ntBASIC19.08■□□□□ 0.64
CAPN9O14815 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN9O14815 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPN9O14815 AL645929.1-201ENST00000420084 975 ntBASIC19.08■□□□□ 0.64
CAPN9O14815 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN9O14815 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN9O14815 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.08■□□□□ 0.64
CAPN9O14815 AL136038.3-201ENST00000561909 1096 ntBASIC19.08■□□□□ 0.64
CAPN9O14815 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN9O14815 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CAPN9O14815 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CAPN9O14815 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CAPN9O14815 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN9O14815 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPN9O14815 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN9O14815 AP000997.3-201ENST00000623333 2250 ntBASIC19.08■□□□□ 0.64
CAPN9O14815 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN9O14815 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPN9O14815 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN9O14815 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN9O14815 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN9O14815 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN9O14815 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
CAPN9O14815 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPN9O14815 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN9O14815 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CAPN9O14815 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN9O14815 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
CAPN9O14815 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN9O14815 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 AP003733.1-201ENST00000491725 852 ntBASIC19.07■□□□□ 0.64
CAPN9O14815 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN9O14815 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN9O14815 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPN9O14815 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN9O14815 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CAPN9O14815 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPN9O14815 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CAPN9O14815 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CAPN9O14815 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CAPN9O14815 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN9O14815 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CAPN9O14815 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CAPN9O14815 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN9O14815 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CAPN9O14815 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 SPDYE13P-201ENST00000445314 798 ntBASIC19.06■□□□□ 0.64
CAPN9O14815 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.06■□□□□ 0.64
CAPN9O14815 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.06■□□□□ 0.64
CAPN9O14815 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.06■□□□□ 0.64
CAPN9O14815 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPN9O14815 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 AC135050.7-201ENST00000624508 2218 ntBASIC19.06■□□□□ 0.64
CAPN9O14815 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CAPN9O14815 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPN9O14815 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CAPN9O14815 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN9O14815 AL162741.1-201ENST00000565563 1558 ntBASIC19.06■□□□□ 0.64
CAPN9O14815 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN9O14815 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms