Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.28■□□□□ 0.52
AP3B1O00203 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.28■□□□□ 0.52
AP3B1O00203 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.28■□□□□ 0.52
AP3B1O00203 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
AP3B1O00203 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.27■□□□□ 0.52
AP3B1O00203 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
AP3B1O00203 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
AP3B1O00203 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
AP3B1O00203 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP3B1O00203 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP3B1O00203 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
AP3B1O00203 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.27■□□□□ 0.52
AP3B1O00203 AC067852.2-201ENST00000590513 2313 ntBASIC18.27■□□□□ 0.52
AP3B1O00203 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP3B1O00203 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
AP3B1O00203 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP3B1O00203 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.27■□□□□ 0.52
AP3B1O00203 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.27■□□□□ 0.52
AP3B1O00203 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP3B1O00203 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.27■□□□□ 0.52
AP3B1O00203 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.27■□□□□ 0.52
AP3B1O00203 AL157888.1-201ENST00000631930 593 ntBASIC18.27■□□□□ 0.52
AP3B1O00203 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP3B1O00203 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
AP3B1O00203 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP3B1O00203 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP3B1O00203 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
AP3B1O00203 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP3B1O00203 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
AP3B1O00203 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.26■□□□□ 0.51
AP3B1O00203 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
AP3B1O00203 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 AC087499.1-201ENST00000418141 1075 ntBASIC18.26■□□□□ 0.51
AP3B1O00203 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.26■□□□□ 0.51
AP3B1O00203 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.26■□□□□ 0.51
AP3B1O00203 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.26■□□□□ 0.51
AP3B1O00203 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.26■□□□□ 0.51
AP3B1O00203 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.26■□□□□ 0.51
AP3B1O00203 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
AP3B1O00203 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.26■□□□□ 0.51
AP3B1O00203 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
AP3B1O00203 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
AP3B1O00203 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
AP3B1O00203 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3B1O00203 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
AP3B1O00203 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3B1O00203 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
AP3B1O00203 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
AP3B1O00203 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
AP3B1O00203 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 SLC25A3P1-201ENST00000443844 931 ntBASIC18.25■□□□□ 0.51
AP3B1O00203 ATP5G1P1-201ENST00000448724 379 ntBASIC18.25■□□□□ 0.51
AP3B1O00203 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
AP3B1O00203 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.25■□□□□ 0.51
AP3B1O00203 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3B1O00203 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
AP3B1O00203 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3B1O00203 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.25■□□□□ 0.51
AP3B1O00203 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms