Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 AC090164.3-201ENST00000610780 2143 ntBASIC20.3■□□□□ 0.84
DDX39AO00148 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX39AO00148 AL096828.2-201ENST00000567259 1965 ntBASIC20.3■□□□□ 0.84
DDX39AO00148 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DDX39AO00148 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX39AO00148 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
DDX39AO00148 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
DDX39AO00148 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
DDX39AO00148 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
DDX39AO00148 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.29■□□□□ 0.84
DDX39AO00148 KRT18P65-201ENST00000439811 1286 ntBASIC20.29■□□□□ 0.84
DDX39AO00148 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.29■□□□□ 0.84
DDX39AO00148 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX39AO00148 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX39AO00148 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
DDX39AO00148 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX39AO00148 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX39AO00148 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX39AO00148 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
DDX39AO00148 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DDX39AO00148 HTR7P1-202ENST00000624664 4411 ntBASIC20.28■□□□□ 0.84
DDX39AO00148 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX39AO00148 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX39AO00148 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
DDX39AO00148 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
DDX39AO00148 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
DDX39AO00148 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
DDX39AO00148 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.28■□□□□ 0.84
DDX39AO00148 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.28■□□□□ 0.84
DDX39AO00148 AC246785.2-201ENST00000432512 513 ntBASIC20.28■□□□□ 0.84
DDX39AO00148 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX39AO00148 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.28■□□□□ 0.84
DDX39AO00148 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
DDX39AO00148 AC005336.2-201ENST00000593183 939 ntBASIC20.28■□□□□ 0.84
DDX39AO00148 IFNL4P1-201ENST00000607083 540 ntBASIC20.28■□□□□ 0.84
DDX39AO00148 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
DDX39AO00148 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX39AO00148 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX39AO00148 AC093677.2-201ENST00000600169 1863 ntBASIC20.28■□□□□ 0.84
DDX39AO00148 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
DDX39AO00148 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX39AO00148 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX39AO00148 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX39AO00148 AC093010.1-201ENST00000473625 1624 ntBASIC20.27■□□□□ 0.84
DDX39AO00148 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX39AO00148 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX39AO00148 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX39AO00148 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX39AO00148 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX39AO00148 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.27■□□□□ 0.84
DDX39AO00148 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX39AO00148 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX39AO00148 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.27■□□□□ 0.84
DDX39AO00148 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
DDX39AO00148 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX39AO00148 TSPY19P-201ENST00000418461 509 ntBASIC20.27■□□□□ 0.84
DDX39AO00148 TSPY18P-201ENST00000441642 509 ntBASIC20.27■□□□□ 0.84
DDX39AO00148 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.27■□□□□ 0.84
DDX39AO00148 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.27■□□□□ 0.84
DDX39AO00148 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX39AO00148 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX39AO00148 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX39AO00148 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
DDX39AO00148 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms