Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 FP475955.4-201ENST00000623131 1990 ntBASIC17.62■□□□□ 0.41
C4orf47A7E2U8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
C4orf47A7E2U8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 MIR149-201ENST00000384879 89 ntBASIC17.61■□□□□ 0.41
C4orf47A7E2U8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 AP000974.1-201ENST00000623909 2387 ntBASIC17.61■□□□□ 0.41
C4orf47A7E2U8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C4orf47A7E2U8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 MCCD1P2-201ENST00000423228 335 ntBASIC17.6■□□□□ 0.41
C4orf47A7E2U8 AL645939.2-201ENST00000427340 991 ntBASIC17.6■□□□□ 0.41
C4orf47A7E2U8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 MIR4469-201ENST00000583919 79 ntBASIC17.6■□□□□ 0.41
C4orf47A7E2U8 AC097374.2-201ENST00000618617 1306 ntBASIC17.6■□□□□ 0.41
C4orf47A7E2U8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 AC099343.3-201ENST00000605834 2503 ntBASIC17.6■□□□□ 0.41
C4orf47A7E2U8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C4orf47A7E2U8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms