Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPSF4LA6NMK7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPSF4LA6NMK7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
CPSF4LA6NMK7 KRT17P2-201ENST00000300992 1314 ntBASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 INGX-201ENST00000359239 846 ntBASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 AP006294.2-201ENST00000641667 209 ntBASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CPSF4LA6NMK7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 AL024508.2-201ENST00000607749 1894 ntBASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 AC010653.2-201ENST00000623505 997 ntBASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPSF4LA6NMK7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CPSF4LA6NMK7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPSF4LA6NMK7 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.68■□□□□ 0.26
CPSF4LA6NMK7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.68■□□□□ 0.26
CPSF4LA6NMK7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CPSF4LA6NMK7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms