Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 HLA-A-209ENST00000638375 975 ntBASIC12.87□□□□□ -0.35
LINC01549A6NIU2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01549A6NIU2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 AC034268.1-201ENST00000441047 882 ntBASIC12.86□□□□□ -0.35
LINC01549A6NIU2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 C1QL1P1-201ENST00000568105 661 ntBASIC12.86□□□□□ -0.35
LINC01549A6NIU2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 AL109659.2-201ENST00000606809 1674 ntBASIC12.86□□□□□ -0.35
LINC01549A6NIU2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
LINC01549A6NIU2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms