Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 AC145285.6-201ENST00000604632 637 ntBASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 AC133561.5-201ENST00000635547 218 ntBASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRGV1A0A0A0MS02 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.15□□□□□ -0.31
TRGV1A0A0A0MS02 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRGV1A0A0A0MS02 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRGV1A0A0A0MS02 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
TRGV1A0A0A0MS02 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 ECEL1P3-201ENST00000427961 737 ntBASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 NEK4P2-201ENST00000580004 1012 ntBASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 MIR3180-4-201ENST00000582223 153 ntBASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 AC073912.3-201ENST00000624414 853 ntBASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 FZD10-202ENST00000539839 3282 ntBASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TRGV1A0A0A0MS02 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 NOC2LP1-202ENST00000452600 2235 ntBASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV1A0A0A0MS02 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms