Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 KRT8P50-201ENST00000562022 1438 ntBASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV18A0A075B6X5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 AC034236.2-201ENST00000606662 1610 ntBASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 AL355312.1-201ENST00000407115 2176 ntBASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV18A0A075B6X5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms