Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 OR6D1P-202ENST00000641007 5290 ntBASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 AC012313.1-201ENST00000593393 3059 ntBASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 AL136038.3-201ENST00000561909 1096 ntBASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA3PQ9Y6N3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCA3PQ9Y6N3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 AL645929.1-201ENST00000420084 975 ntBASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 FAM86EP-206ENST00000510506 987 ntBASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 AC024563.2-201ENST00000603282 481 ntBASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 AC091076.1-201ENST00000610741 619 ntBASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms