Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 AC091917.2-201ENST00000505002 744 ntBASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 MIR3908-201ENST00000579798 126 ntBASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 NTF6B-201ENST00000591913 560 ntBASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 AC083849.1-201ENST00000615227 514 ntBASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB13Q9Y5F0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 AP003733.1-201ENST00000491725 852 ntBASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 AC138028.4-201ENST00000564984 1845 ntBASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB13Q9Y5F0 FLJ13224-201ENST00000313737 1514 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms