Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 AD001527.2-201ENST00000622994 785 ntBASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 SIGLEC16-201ENST00000599858 1437 ntBASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 MIR4469-201ENST00000583919 79 ntBASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 AC002310.6-201ENST00000624451 1377 ntBASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.72■■□□□ 1.23
RTCBQ9Y3I0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 CYMP-203ENST00000474680 1263 ntBASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 AC122714.2-201ENST00000502787 707 ntBASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 RFPL4AP1-201ENST00000530883 850 ntBASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RTCBQ9Y3I0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RTCBQ9Y3I0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.7■■□□□ 1.23
RTCBQ9Y3I0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RTCBQ9Y3I0 AC254562.1-201ENST00000417586 456 ntBASIC22.7■■□□□ 1.22
RTCBQ9Y3I0 AC096633.1-201ENST00000422446 749 ntBASIC22.7■■□□□ 1.22
RTCBQ9Y3I0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC22.7■■□□□ 1.22
RTCBQ9Y3I0 ALG1L5P-201ENST00000482043 771 ntBASIC22.7■■□□□ 1.22
RTCBQ9Y3I0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
RTCBQ9Y3I0 MIR3197-201ENST00000582241 73 ntBASIC22.7■■□□□ 1.22
RTCBQ9Y3I0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RTCBQ9Y3I0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
RTCBQ9Y3I0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RTCBQ9Y3I0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.7■■□□□ 1.22
RTCBQ9Y3I0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 SPDYE21P-201ENST00000413323 827 ntBASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.69■■□□□ 1.22
RTCBQ9Y3I0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 AC010460.3-201ENST00000511359 1579 ntBASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms